Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is 103487347
Identifier: 103487347
GI number: 103487347
Start: 1958383
End: 1959003
Strand: Direct
Name: 103487347
Synonym: Sala_1863
Alternate gene names: NA
Gene position: 1958383-1959003 (Clockwise)
Preceding gene: 103487346
Following gene: 103487378
Centisome position: 58.54
GC content: 69.57
Gene sequence:
>621_bases ATGACCCGTCCCATCCTCTATCATTGCCCCGACGCGCGCTCGCTGCGCTGCCTGTGGGCGGCCGAAGAGGCGGGGATCGA CGTCGACCTCAGGCTGTTGCGGTTTCCGCCCCGCGCGTTCGAGCCCGATTACCGCGCGGTGAACCCGCTGATGACCGTGC CCGGCTGGGTGGAGGATGGCCGGTTGATGACCGAATCGGCGGCGATCTGCGAACGCATCGCCGAAGGAACGTCGCTGGAG GTGCGCCGCAACGAGGCCGATTATTGGGACTATCGCAACTGGCTGCACCGCAGCGACGCGACGCTGACCTTCCCGCTCGC GATCATGATCCGCTACACGCGCGTCGAGCCCGAGGAGCGGCGGCTGACCCAGGCCGTCGCGGATTACAAGGCCTTCTTCG GCGGCCGCGCCAGGAGCATCGAGGCGGCGCTCGCCGACGGGCGCGAATGGCTCGTCGCGGGGCGCTTCACCATCGCCGAC ATCGCGATCGGCTATGCCGCCTTCCTCGCGACGACGCTGGGTGCGGACGATGTGCTGGGCGAGGCGACAAAGGCATGGCT CGCCCGCTGCGTGGCGCGCGACGGTTTCCGGCGCGCGCGCGAACGACAGGCCGCGACCTGA
Upstream 100 bases:
>100_bases ACACGACGTGGATCGGCGCGCCGCTGATCGTCGCATCGGGGCTGTTCATCGCCTGGCGCGAGCATCGCCGCCATATCGAC CGCCCGAAGGAGGTTGCCGC
Downstream 100 bases:
>100_bases CGAAAAAGGGCTCCACCAATAAGGTGAAACCCTTCGTGCCCCCGTGCATGGCAAAGCCAACGAGGAAAACCATCGGCCCT TTGGGGTGTAGGTCGCGTAA
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase-Like; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase N-Terminal Domain Protein
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MTRPILYHCPDARSLRCLWAAEEAGIDVDLRLLRFPPRAFEPDYRAVNPLMTVPGWVEDGRLMTESAAICERIAEGTSLE VRRNEADYWDYRNWLHRSDATLTFPLAIMIRYTRVEPEERRLTQAVADYKAFFGGRARSIEAALADGREWLVAGRFTIAD IAIGYAAFLATTLGADDVLGEATKAWLARCVARDGFRRARERQAAT
Sequences:
>Translated_206_residues MTRPILYHCPDARSLRCLWAAEEAGIDVDLRLLRFPPRAFEPDYRAVNPLMTVPGWVEDGRLMTESAAICERIAEGTSLE VRRNEADYWDYRNWLHRSDATLTFPLAIMIRYTRVEPEERRLTQAVADYKAFFGGRARSIEAALADGREWLVAGRFTIAD IAIGYAAFLATTLGADDVLGEATKAWLARCVARDGFRRARERQAAT >Mature_205_residues TRPILYHCPDARSLRCLWAAEEAGIDVDLRLLRFPPRAFEPDYRAVNPLMTVPGWVEDGRLMTESAAICERIAEGTSLEV RRNEADYWDYRNWLHRSDATLTFPLAIMIRYTRVEPEERRLTQAVADYKAFFGGRARSIEAALADGREWLVAGRFTIADI AIGYAAFLATTLGADDVLGEATKAWLARCVARDGFRRARERQAAT
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23343; Mature: 23212
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPILYHCPDARSLRCLWAAEEAGIDVDLRLLRFPPRAFEPDYRAVNPLMTVPGWVEDG CCCCEEEECCCCCCEEEEEEHHHCCCCEEEEEEECCCCCCCCCCHHCCCHHCCCCCCCCC RLMTESAAICERIAEGTSLEVRRNEADYWDYRNWLHRSDATLTFPLAIMIRYTRVEPEER EEEHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCEEEEHHHHEEHHHCCCHHHH RLTQAVADYKAFFGGRARSIEAALADGREWLVAGRFTIADIAIGYAAFLATTLGADDVLG HHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHH EATKAWLARCVARDGFRRARERQAAT HHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TRPILYHCPDARSLRCLWAAEEAGIDVDLRLLRFPPRAFEPDYRAVNPLMTVPGWVEDG CCCEEEECCCCCCEEEEEEHHHCCCCEEEEEEECCCCCCCCCCHHCCCHHCCCCCCCCC RLMTESAAICERIAEGTSLEVRRNEADYWDYRNWLHRSDATLTFPLAIMIRYTRVEPEER EEEHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCEEEEHHHHEEHHHCCCHHHH RLTQAVADYKAFFGGRARSIEAALADGREWLVAGRFTIADIAIGYAAFLATTLGADDVLG HHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHH EATKAWLARCVARDGFRRARERQAAT HHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA