Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487311

Identifier: 103487311

GI number: 103487311

Start: 1922795

End: 1923532

Strand: Direct

Name: 103487311

Synonym: Sala_1827

Alternate gene names: NA

Gene position: 1922795-1923532 (Clockwise)

Preceding gene: 103487309

Following gene: 103487314

Centisome position: 57.48

GC content: 69.38

Gene sequence:

>738_bases
GTGAATGAATTGATCGATCGCAGGGCATTGCTGGCCGGGCTCGCGGGTGCGGGCGCGGTGGCCGCCATTCCTGCGCGGGC
GCAGCTTCCGAACTGGGTCCGGCAGCCGGTGACGCCGCCGCCGGTCGATTATCTGGCCGTAGCGAAGAAGCAGCTTGCGA
TGCAGGCGCGCAACATCCCGCAGACCGACCGCGTCGGTGTCGTCGATTTCGGCCTGCCGTCGTCGCGCCCGCGCTTTGCG
CTGGTCGACATGGTCGCGGGCACGGTCGACCTGTTCCCGGTAACGCACGGCCGCGGCTCGGACCCGCAGCACGACGGCTG
GCTCAAGAGCTTCTCGAACCGCGTCGGCAGCCTCGCGACCTCACGCGGGGCGTATCGCACCAGCGATTATTATTGGGGCG
CCAACGGGTCGTCGATGCGGCTTGCGGGGCTGGAACCCGACAACAGCAACGCCGACGTTCGCGCGATCGTCGTCCATGGC
GCCTGGTACGCCGACCCGGCGCTGATCGCGACGCAGGGCAAGCTGGGGCGCAGCGAGGGCTGTTTCGTGTTCGGCGAAGA
ATTGCTGCCGATGATCCTCTACAAGCTCGGCCCCGGACGCCTGCTCTTCGCCGACCGGCTGAGCGCGCCGCCACCGCTGC
CCGCGCCGTTCGACCTGCCCGCCGACCCGCTGCCGGGGATGGAAAATCTGCGCCGCGCAAGCAGCGTGAACGGGCCGCTG
CCGACGACGGCAGACTGA

Upstream 100 bases:

>100_bases
GCATGAAGGGGAACCACCAGCTTGCCTTTCGACGCGGAAACACGATTTATGCAAAGTCGAGGGACCGCCAAAGGGCGGCC
GATGCGGGGTTGCTGTCAAA

Downstream 100 bases:

>100_bases
CGAACTGACGACGAGCCGCAATGGCGGTCGGTCGGCAGCAGCGGCGAAAGACCAGCACCGCATTGTCTCACTTCGGTCGA
AACCAGTCCCGCGCTATTCC

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MNELIDRRALLAGLAGAGAVAAIPARAQLPNWVRQPVTPPPVDYLAVAKKQLAMQARNIPQTDRVGVVDFGLPSSRPRFA
LVDMVAGTVDLFPVTHGRGSDPQHDGWLKSFSNRVGSLATSRGAYRTSDYYWGANGSSMRLAGLEPDNSNADVRAIVVHG
AWYADPALIATQGKLGRSEGCFVFGEELLPMILYKLGPGRLLFADRLSAPPPLPAPFDLPADPLPGMENLRRASSVNGPL
PTTAD

Sequences:

>Translated_245_residues
MNELIDRRALLAGLAGAGAVAAIPARAQLPNWVRQPVTPPPVDYLAVAKKQLAMQARNIPQTDRVGVVDFGLPSSRPRFA
LVDMVAGTVDLFPVTHGRGSDPQHDGWLKSFSNRVGSLATSRGAYRTSDYYWGANGSSMRLAGLEPDNSNADVRAIVVHG
AWYADPALIATQGKLGRSEGCFVFGEELLPMILYKLGPGRLLFADRLSAPPPLPAPFDLPADPLPGMENLRRASSVNGPL
PTTAD
>Mature_245_residues
MNELIDRRALLAGLAGAGAVAAIPARAQLPNWVRQPVTPPPVDYLAVAKKQLAMQARNIPQTDRVGVVDFGLPSSRPRFA
LVDMVAGTVDLFPVTHGRGSDPQHDGWLKSFSNRVGSLATSRGAYRTSDYYWGANGSSMRLAGLEPDNSNADVRAIVVHG
AWYADPALIATQGKLGRSEGCFVFGEELLPMILYKLGPGRLLFADRLSAPPPLPAPFDLPADPLPGMENLRRASSVNGPL
PTTAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26161; Mature: 26161

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNELIDRRALLAGLAGAGAVAAIPARAQLPNWVRQPVTPPPVDYLAVAKKQLAMQARNIP
CCHHHHHHHHHHHHCCCCCCEECCCHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC
QTDRVGVVDFGLPSSRPRFALVDMVAGTVDLFPVTHGRGSDPQHDGWLKSFSNRVGSLAT
CCCCEEEEEECCCCCCCCEEHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
SRGAYRTSDYYWGANGSSMRLAGLEPDNSNADVRAIVVHGAWYADPALIATQGKLGRSEG
CCCCCCCCCEEECCCCCEEEEEECCCCCCCCCEEEEEEECCEECCCEEEEECCCCCCCCC
CFVFGEELLPMILYKLGPGRLLFADRLSAPPPLPAPFDLPADPLPGMENLRRASSVNGPL
CEEECHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
PTTAD
CCCCC
>Mature Secondary Structure
MNELIDRRALLAGLAGAGAVAAIPARAQLPNWVRQPVTPPPVDYLAVAKKQLAMQARNIP
CCHHHHHHHHHHHHCCCCCCEECCCHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC
QTDRVGVVDFGLPSSRPRFALVDMVAGTVDLFPVTHGRGSDPQHDGWLKSFSNRVGSLAT
CCCCEEEEEECCCCCCCCEEHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
SRGAYRTSDYYWGANGSSMRLAGLEPDNSNADVRAIVVHGAWYADPALIATQGKLGRSEG
CCCCCCCCCEEECCCCCEEEEEECCCCCCCCCEEEEEEECCEECCCEEEEECCCCCCCCC
CFVFGEELLPMILYKLGPGRLLFADRLSAPPPLPAPFDLPADPLPGMENLRRASSVNGPL
CEEECHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
PTTAD
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA