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The map label for this gene is ycjD [H]

Identifier: 103487259

GI number: 103487259

Start: 1872979

End: 1873419

Strand: Direct

Name: ycjD [H]

Synonym: Sala_1774

Alternate gene names: 103487259

Gene position: 1872979-1873419 (Clockwise)

Preceding gene: 103487258

Following gene: 103487260

Centisome position: 55.99

GC content: 64.63

Gene sequence:

>441_bases
ATGCGGACCTATCGCAATCAACCCGCCGGCACTGTCTCCCGCGCTCGCACCCTGCGCAAGCATGCCACCGGCGCTGAAAA
GCGGATGTGGCAGGCGCTGCGCGAAACCTTCCCGGCCCTCAAATGGCGGCGACAGGTTCCGATCGGCCCCTATTTCGCCG
ACTTCTTCAGCTTCGCGGCGAAGCTGGTGATCGAGGTCGACGGCGGCCAGCACGCGGAAGCGGCGTCCTATGACGCCCGC
CGCACCGAATTTTTGCAAGCGCAGGGCCTCACCGTCCTCCGCTTCTGGAACAACGACGTCCTGGAAAACACACGCGGCGT
CATGGAAACAATCTCCCTCTCCCTCCGGGAGAGGGAAGGAGCGACGCAGTCGCGGAAGGGTGAGGGCGACCAATCGCCGT
CTGCACCCAACCGCCAACCACCCTCACCTTCCCAAGGCTGA

Upstream 100 bases:

>100_bases
CCGATTACGACGAGTGTCTGGCTTGTCAGTGAGTGGTCCCTCTCCCACCGGGAGAGGGAGGGAGGCGCGAAGCGCCGGAA
GGGAGGGGGTGACGACCCCG

Downstream 100 bases:

>100_bases
CGCCTTGGGCCCCTTCCTCTCCCGGTGGGAGAGGAGTAAAGACATGCCAGTCCGGAGACCGATGAGATGCCCCTTCTAGA
AGCCCGCAAGACCTACAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MRTYRNQPAGTVSRARTLRKHATGAEKRMWQALRETFPALKWRRQVPIGPYFADFFSFAAKLVIEVDGGQHAEAASYDAR
RTEFLQAQGLTVLRFWNNDVLENTRGVMETISLSLREREGATQSRKGEGDQSPSAPNRQPPSPSQG

Sequences:

>Translated_146_residues
MRTYRNQPAGTVSRARTLRKHATGAEKRMWQALRETFPALKWRRQVPIGPYFADFFSFAAKLVIEVDGGQHAEAASYDAR
RTEFLQAQGLTVLRFWNNDVLENTRGVMETISLSLREREGATQSRKGEGDQSPSAPNRQPPSPSQG
>Mature_146_residues
MRTYRNQPAGTVSRARTLRKHATGAEKRMWQALRETFPALKWRRQVPIGPYFADFFSFAAKLVIEVDGGQHAEAASYDAR
RTEFLQAQGLTVLRFWNNDVLENTRGVMETISLSLREREGATQSRKGEGDQSPSAPNRQPPSPSQG

Specific function: Unknown

COG id: COG2852

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1162 and to HI_0925 [H]

Homologues:

Organism=Escherichia coli, GI1787546, Length=107, Percent_Identity=47.6635514018692, Blast_Score=106, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004603
- InterPro:   IPR007569
- InterPro:   IPR011335 [H]

Pfam domain/function: PF04480 DUF559 [H]

EC number: NA

Molecular weight: Translated: 16465; Mature: 16465

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTYRNQPAGTVSRARTLRKHATGAEKRMWQALRETFPALKWRRQVPIGPYFADFFSFAA
CCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
KLVIEVDGGQHAEAASYDARRTEFLQAQGLTVLRFWNNDVLENTRGVMETISLSLREREG
HEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCC
ATQSRKGEGDQSPSAPNRQPPSPSQG
CCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRTYRNQPAGTVSRARTLRKHATGAEKRMWQALRETFPALKWRRQVPIGPYFADFFSFAA
CCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
KLVIEVDGGQHAEAASYDARRTEFLQAQGLTVLRFWNNDVLENTRGVMETISLSLREREG
HEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCC
ATQSRKGEGDQSPSAPNRQPPSPSQG
CCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 8075395; 1364817 [H]