Definition | Sphingopyxis alaskensis RB2256, complete genome. |
---|---|
Accession | NC_008048 |
Length | 3,345,170 |
Click here to switch to the map view.
The map label for this gene is 103486151
Identifier: 103486151
GI number: 103486151
Start: 668988
End: 669362
Strand: Direct
Name: 103486151
Synonym: Sala_0658
Alternate gene names: NA
Gene position: 668988-669362 (Clockwise)
Preceding gene: 103486150
Following gene: 103486152
Centisome position: 20.0
GC content: 58.93
Gene sequence:
>375_bases ATGGTTGATCTGACCATCGATCATGTTCAGCTTGCCATCCCCATCGGCGGTGAAGATGCGGCGCGGAGTTTTTATGGCGT ATTGCTGGGCTTGAGTGAATTGCCCAAGCCGCCCGAGATGGTGGGGCGCGGGGGGTGCTGGTTTCAACTCGGCGCGCAGC AATTGCATGTCGGCGTCGAGGCTGATTTTCACGCCGCGAAGAAAGCCCATATCGCGTTGGCGACCGACGAATTGGCCGCG CTGCGACACCGGATTGAGGCCGCTGGCCATGCGACCAAAGATGACAGCCCGGTCGAGGGGCGCTACCGTTTTTTTGCAGA AGACCCTTTCGGCAATCGAATCGAGTTTATGGACAGGGTGGCACGGGGCATATGA
Upstream 100 bases:
>100_bases ATCTGGCGAGCGGCGTGACAGGCGAAACGCACCACGTCGATGCGGGTTATCACACCATCGGCATGAAGCAGGAAGATGCG CCGGACATCGCGCTTGCGTG
Downstream 100 bases:
>100_bases GTTTCAACAGCTTCGGACGCGTCCTGCGCTTTACGACCTGGGGGGAAAGTCACGGGCCCGCGCTCGGTGCGGTCGTCGAT GGCTGCCCGCCGCGGCTGTC
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein; Glyoxalase; Glyoxalase/Bleomycin Resistance Protein; Lactoylglutathione Lyase-Like Lyase; Peptidase
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MVDLTIDHVQLAIPIGGEDAARSFYGVLLGLSELPKPPEMVGRGGCWFQLGAQQLHVGVEADFHAAKKAHIALATDELAA LRHRIEAAGHATKDDSPVEGRYRFFAEDPFGNRIEFMDRVARGI
Sequences:
>Translated_124_residues MVDLTIDHVQLAIPIGGEDAARSFYGVLLGLSELPKPPEMVGRGGCWFQLGAQQLHVGVEADFHAAKKAHIALATDELAA LRHRIEAAGHATKDDSPVEGRYRFFAEDPFGNRIEFMDRVARGI >Mature_124_residues MVDLTIDHVQLAIPIGGEDAARSFYGVLLGLSELPKPPEMVGRGGCWFQLGAQQLHVGVEADFHAAKKAHIALATDELAA LRHRIEAAGHATKDDSPVEGRYRFFAEDPFGNRIEFMDRVARGI
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13551; Mature: 13551
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDLTIDHVQLAIPIGGEDAARSFYGVLLGLSELPKPPEMVGRGGCWFQLGAQQLHVGVE CCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEECHHHEEECCC ADFHAAKKAHIALATDELAALRHRIEAAGHATKDDSPVEGRYRFFAEDPFGNRIEFMDRV CCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHH ARGI HHCC >Mature Secondary Structure MVDLTIDHVQLAIPIGGEDAARSFYGVLLGLSELPKPPEMVGRGGCWFQLGAQQLHVGVE CCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEECHHHEEECCC ADFHAAKKAHIALATDELAALRHRIEAAGHATKDDSPVEGRYRFFAEDPFGNRIEFMDRV CCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHH ARGI HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA