Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is yexA [H]
Identifier: 103486083
GI number: 103486083
Start: 600146
End: 600376
Strand: Direct
Name: yexA [H]
Synonym: Sala_0590
Alternate gene names: 103486083
Gene position: 600146-600376 (Clockwise)
Preceding gene: 103486082
Following gene: 103486084
Centisome position: 17.94
GC content: 61.9
Gene sequence:
>231_bases ATGAAAGTCAATGTCTATGTGACGCTCAAGCCGGGAGTGCTCGATCCGCAGGGCAAGGCGATCCACCATGCGCTCGAGGG ACTGGGCTTCACGGGTGTTGCCGACGTGCGCGCAGGCCGCTTCATCGAACTCGACGTCGCTGACGACACGAGCGACGTCG ACCTCGACGCCATGTGCGCCAGGTTGCTCGCCAACACGGTGATCGAAAACTACCGCATCGAACGCGCCTGA
Upstream 100 bases:
>100_bases CGAAGAAGCATATTTTTCGCAGGTACGGCCCTTGCCCGAAAGGTGATTCGCGGGCATAGGCGCGCGCATCGTCACGCCCT CCCAAGCAAAGGTCCGCCCC
Downstream 100 bases:
>100_bases GCCGAGCCAAGCTGATCCAAGCCAAGGAGCCTGCCCCATGAAGACCGCCGTCATCGTCTTTCCCGGCTCCAACTGCGACC GCGACATGGCCGTCGCGCTC
Product: phosphoribosylformylglycinamidine synthetase PurS
Products: ADP; phosphate; 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine; L-glutamate
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MKVNVYVTLKPGVLDPQGKAIHHALEGLGFTGVADVRAGRFIELDVADDTSDVDLDAMCARLLANTVIENYRIERA
Sequences:
>Translated_76_residues MKVNVYVTLKPGVLDPQGKAIHHALEGLGFTGVADVRAGRFIELDVADDTSDVDLDAMCARLLANTVIENYRIERA >Mature_76_residues MKVNVYVTLKPGVLDPQGKAIHHALEGLGFTGVADVRAGRFIELDVADDTSDVDLDAMCARLLANTVIENYRIERA
Specific function: Unknown
COG id: COG1828
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0062 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003850 - ProDom: PD010362 [H]
Pfam domain/function: PF02700 PurS [H]
EC number: 6.3.5.3
Molecular weight: Translated: 8270; Mature: 8270
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVNVYVTLKPGVLDPQGKAIHHALEGLGFTGVADVRAGRFIELDVADDTSDVDLDAMCA CEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHH RLLANTVIENYRIERA HHHHHHHHHHEEECCC >Mature Secondary Structure MKVNVYVTLKPGVLDPQGKAIHHALEGLGFTGVADVRAGRFIELDVADDTSDVDLDAMCA CEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHH RLLANTVIENYRIERA HHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide; L-glutamine; H2O
Specific reaction: ATP + N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide + L-glutamine + H2O = ADP + phosphate + 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine + L-glutamate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3036807; 9384377 [H]