Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is 103486082
Identifier: 103486082
GI number: 103486082
Start: 599843
End: 600091
Strand: Direct
Name: 103486082
Synonym: Sala_0589
Alternate gene names: NA
Gene position: 599843-600091 (Clockwise)
Preceding gene: 103486079
Following gene: 103486083
Centisome position: 17.93
GC content: 55.82
Gene sequence:
>249_bases TTGGCCGCACTTGGGTTTGCGACCCAATTGCGCATAGGCCGCCTTGGCGCACCGCAATTGGCCGCTCCGCGCAACATCGC GCAGCTGGCTCTCCCTTATTGCGTTGCAGACACAGACGACCATGTGCGAATCCTTCTCAACAATCCCGATGTAGAGATAG TGCGACAGATTCGCAACAAGAAAGATGCGACTGGTTCGCAGTCCGAAGAAGCATATTTTTCGCAGGTACGGCCCTTGCCC GAAAGGTGA
Upstream 100 bases:
>100_bases CCCGGACCCCGCCAGGCCAAGGGTGAAAATGGCAGAAATCTGCGAAAAATCAGGCGGCTGCGGTCGCCTCGCTGATGATA TTGCGAGCGAATGACAGGCA
Downstream 100 bases:
>100_bases TTCGCGGGCATAGGCGCGCGCATCGTCACGCCCTCCCAAGCAAAGGTCCGCCCCATGAAAGTCAATGTCTATGTGACGCT CAAGCCGGGAGTGCTCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MAALGFATQLRIGRLGAPQLAAPRNIAQLALPYCVADTDDHVRILLNNPDVEIVRQIRNKKDATGSQSEEAYFSQVRPLP ER
Sequences:
>Translated_82_residues MAALGFATQLRIGRLGAPQLAAPRNIAQLALPYCVADTDDHVRILLNNPDVEIVRQIRNKKDATGSQSEEAYFSQVRPLP ER >Mature_81_residues AALGFATQLRIGRLGAPQLAAPRNIAQLALPYCVADTDDHVRILLNNPDVEIVRQIRNKKDATGSQSEEAYFSQVRPLPE R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9070; Mature: 8939
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALGFATQLRIGRLGAPQLAAPRNIAQLALPYCVADTDDHVRILLNNPDVEIVRQIRNK CCCCCCCCHHEECCCCCCCCCCCCCHHHHHCCHHCCCCCCCEEEEECCCCHHHHHHHHCC KDATGSQSEEAYFSQVRPLPER CCCCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure AALGFATQLRIGRLGAPQLAAPRNIAQLALPYCVADTDDHVRILLNNPDVEIVRQIRNK CCCCCCCHHEECCCCCCCCCCCCCHHHHHCCHHCCCCCCCEEEEECCCCHHHHHHHHCC KDATGSQSEEAYFSQVRPLPER CCCCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA