Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is purQ
Identifier: 103486084
GI number: 103486084
Start: 600414
End: 601079
Strand: Direct
Name: purQ
Synonym: Sala_0591
Alternate gene names: 103486084
Gene position: 600414-601079 (Clockwise)
Preceding gene: 103486083
Following gene: 103486088
Centisome position: 17.95
GC content: 68.32
Gene sequence:
>666_bases ATGAAGACCGCCGTCATCGTCTTTCCCGGCTCCAACTGCGACCGCGACATGGCCGTCGCGCTCGAGACCGTCACGGGCAA GGCGCCCGCGATGGTATGGCACCGCGAGACCGGGCTGCCTGAGGGCACCGATTTCATCGCGCTGCCGGGGGGCTTTTCCT ATGGTGATTATCTCCGCTCGGGGGCGATGGCGGCGCGTTCGCCGATCCTGCGCGCAGTCGCCGAGGCCGCGGGTCGCGGC GTTCCGGTGCTTGGCGTCTGCAACGGTTTTCAGGTGCTGACCGAGGCGGGGCTGCTTCCCGGCGCGCTGATGCGCAACGC GGGGCTCAACTTCGTCTGCCGCACCGTGCCGCTCAAGGTCGAGAACAGCCAGTCGCTGTTCACCGCAGCCTATGGCGCGG GCGAGGAAATCGCGATTCCGGTGGCGCATCACGACGGCAATTATTTCGCCGACGCCGATACGCTCGACCGGATCGAGGGT GAGGGGCGCGTCGCCTTTCGCTATCTGGACGGCGTCAACGGTTCGGCGCGTGACATTGCGGGCGTCCTCAACGATGCGGG CAATGTGCTCGGCATGATGCCGCACCCCGAGCGCGCGATCGACCGCGCGCACGGCGGCACCGACGGGCTACGCCTGTTCG AGGCGGCGCTCGGCGTCCTCGCCTGA
Upstream 100 bases:
>100_bases GCCATGTGCGCCAGGTTGCTCGCCAACACGGTGATCGAAAACTACCGCATCGAACGCGCCTGAGCCGAGCCAAGCTGATC CAAGCCAAGGAGCCTGCCCC
Downstream 100 bases:
>100_bases CGCCGCATCGGTCCCTGGCAGCCAGCGTCCGACGAGTGCCAGCACCGTTGGCCAGAACATCGTATTCCAGATGTCATGCC AGTGCGCGGTGTCGGGCTGA
Product: phosphoribosylformylglycinamidine synthase I
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase I; FGAM synthase I
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MKTAVIVFPGSNCDRDMAVALETVTGKAPAMVWHRETGLPEGTDFIALPGGFSYGDYLRSGAMAARSPILRAVAEAAGRG VPVLGVCNGFQVLTEAGLLPGALMRNAGLNFVCRTVPLKVENSQSLFTAAYGAGEEIAIPVAHHDGNYFADADTLDRIEG EGRVAFRYLDGVNGSARDIAGVLNDAGNVLGMMPHPERAIDRAHGGTDGLRLFEAALGVLA
Sequences:
>Translated_221_residues MKTAVIVFPGSNCDRDMAVALETVTGKAPAMVWHRETGLPEGTDFIALPGGFSYGDYLRSGAMAARSPILRAVAEAAGRG VPVLGVCNGFQVLTEAGLLPGALMRNAGLNFVCRTVPLKVENSQSLFTAAYGAGEEIAIPVAHHDGNYFADADTLDRIEG EGRVAFRYLDGVNGSARDIAGVLNDAGNVLGMMPHPERAIDRAHGGTDGLRLFEAALGVLA >Mature_221_residues MKTAVIVFPGSNCDRDMAVALETVTGKAPAMVWHRETGLPEGTDFIALPGGFSYGDYLRSGAMAARSPILRAVAEAAGRG VPVLGVCNGFQVLTEAGLLPGALMRNAGLNFVCRTVPLKVENSQSLFTAAYGAGEEIAIPVAHHDGNYFADADTLDRIEG EGRVAFRYLDGVNGSARDIAGVLNDAGNVLGMMPHPERAIDRAHGGTDGLRLFEAALGVLA
Specific function: Unknown
COG id: COG0047
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Escherichia coli, GI48994899, Length=181, Percent_Identity=35.9116022099448, Blast_Score=71, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6321498, Length=189, Percent_Identity=32.2751322751323, Blast_Score=74, Evalue=1e-14, Organism=Drosophila melanogaster, GI24582111, Length=236, Percent_Identity=29.6610169491525, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24582109, Length=236, Percent_Identity=29.6610169491525, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI17137292, Length=236, Percent_Identity=29.6610169491525, Blast_Score=75, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PURQ_SPHAL (Q1GVL0)
Other databases:
- EMBL: CP000356 - RefSeq: YP_615645.1 - ProteinModelPortal: Q1GVL0 - SMR: Q1GVL0 - GeneID: 4080618 - GenomeReviews: CP000356_GR - KEGG: sal:Sala_0591 - NMPDR: fig|317655.9.peg.547 - HOGENOM: HBG302712 - OMA: HPENHVE - ProtClustDB: PRK03619 - BioCyc: SALA317655:SALA_0591-MONOMER - BRENDA: 6.3.5.3 - GO: GO:0005737 - HAMAP: MF_00421 - InterPro: IPR017926 - InterPro: IPR011698 - InterPro: IPR010075 - PIRSF: PIRSF001586 - TIGRFAMs: TIGR01737
Pfam domain/function: PF07685 GATase_3
EC number: =6.3.5.3
Molecular weight: Translated: 23098; Mature: 23098
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 87-87 ACT_SITE 195-195 ACT_SITE 197-197
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTAVIVFPGSNCDRDMAVALETVTGKAPAMVWHRETGLPEGTDFIALPGGFSYGDYLRS CCEEEEEECCCCCCCCCEEEEEHHCCCCCEEEEECCCCCCCCCCEEEECCCCCHHHHHHH GAMAARSPILRAVAEAAGRGVPVLGVCNGFQVLTEAGLLPGALMRNAGLNFVCRTVPLKV CCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCCCHHHHHCCCCCEEEEEEEEEE ENSQSLFTAAYGAGEEIAIPVAHHDGNYFADADTLDRIEGEGRVAFRYLDGVNGSARDIA CCCCCEEEEECCCCCEEEEEEEECCCCEEECCCHHHHHCCCCEEEEEEECCCCCCHHHHH GVLNDAGNVLGMMPHPERAIDRAHGGTDGLRLFEAALGVLA HHHHCCCCEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKTAVIVFPGSNCDRDMAVALETVTGKAPAMVWHRETGLPEGTDFIALPGGFSYGDYLRS CCEEEEEECCCCCCCCCEEEEEHHCCCCCEEEEECCCCCCCCCCEEEECCCCCHHHHHHH GAMAARSPILRAVAEAAGRGVPVLGVCNGFQVLTEAGLLPGALMRNAGLNFVCRTVPLKV CCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCCCHHHHHCCCCCEEEEEEEEEE ENSQSLFTAAYGAGEEIAIPVAHHDGNYFADADTLDRIEGEGRVAFRYLDGVNGSARDIA CCCCCEEEEECCCCCEEEEEEEECCCCEEECCCHHHHHCCCCEEEEEEECCCCCCHHHHH GVLNDAGNVLGMMPHPERAIDRAHGGTDGLRLFEAALGVLA HHHHCCCCEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA