Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486032

Identifier: 103486032

GI number: 103486032

Start: 553586

End: 554122

Strand: Direct

Name: 103486032

Synonym: Sala_0539

Alternate gene names: NA

Gene position: 553586-554122 (Clockwise)

Preceding gene: 103486031

Following gene: 103486033

Centisome position: 16.55

GC content: 66.29

Gene sequence:

>537_bases
ATGCTTGACCGGCTCTATGTCGAGCTGACCGAGGGCGACCTTCGGCTCGTCAAGCTCGCCGAAGCACACCGCGAGGCGCT
GCGCGCCGCTTGCGCCGCCGATGGCGACGTCTGGCCGATCTATTCGTCGAGTTACGATCCCGACCATTTCGACGCGAGTT
TCACCGCGCTCATCGGCCATGAAAGCCGGATGCCTTATGCGGTCATCGAAGGCGAGGCGCTGGTCGGCATGACCGCGTGG
CTGCGTCCCGATGTGTCGGCGCAGACGGTCGAGCTGGGTAACAGCTATATTCACCCCGGCGCGCGCGGCACCGGGCTCAA
CGGCCGGGTCAAGCGGTTGATGCTCGATCACGCCTTTTCCGTCGGTTTTCGCCGCGTCGAGTTCCGCATCGACGAGCGGA
ACGGCCGGTCGCAGGCAGCGGTCGCCAAGCTCGGCTGCACGAAGGAGGGCGTGTTGCGCGCCGAGCGCATCACCTGGACC
GGGCATGTGCGCGACACCGGGCTGTGGTCGATCCTGGCGGAGGAGTGGACGGGATAA

Upstream 100 bases:

>100_bases
GCGGTGGTCGAAGGCGCGCAGACCGAGATCGGCGGCAACGACCGCTATGTCGCGATGTGTCGGCGGCATTTCATGGAAAA
GCGACGCGAGGCGGCCGCGG

Downstream 100 bases:

>100_bases
CAGGCTTCGTCATTGCTTCGCTGCGCTCGCAATGACGAATGGCAGAGGGTCAGCCTTAGTTCAGACTCACCCGGCTATGG
AAGGCGCCATGAAGAACCTC

Product: GCN5-related N-acetyltransferase

Products: NA

Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family; GNAT Family Acetyltransferase; Amino-Acid Acetyltransferase; Acetyltransferase/N-Acetylase; Acetyl Transferase; Acyl-CoA Acyltransferase Domain-Containing Protein; Acetyltransferase Gnat Family; GCN5-Like N-Acetyltransferase; Ribosomal Protein N-Acetylase; Ribosomal-Protein-Alanine Acetyltransferase; N-Acetyltransferase

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MLDRLYVELTEGDLRLVKLAEAHREALRAACAADGDVWPIYSSSYDPDHFDASFTALIGHESRMPYAVIEGEALVGMTAW
LRPDVSAQTVELGNSYIHPGARGTGLNGRVKRLMLDHAFSVGFRRVEFRIDERNGRSQAAVAKLGCTKEGVLRAERITWT
GHVRDTGLWSILAEEWTG

Sequences:

>Translated_178_residues
MLDRLYVELTEGDLRLVKLAEAHREALRAACAADGDVWPIYSSSYDPDHFDASFTALIGHESRMPYAVIEGEALVGMTAW
LRPDVSAQTVELGNSYIHPGARGTGLNGRVKRLMLDHAFSVGFRRVEFRIDERNGRSQAAVAKLGCTKEGVLRAERITWT
GHVRDTGLWSILAEEWTG
>Mature_178_residues
MLDRLYVELTEGDLRLVKLAEAHREALRAACAADGDVWPIYSSSYDPDHFDASFTALIGHESRMPYAVIEGEALVGMTAW
LRPDVSAQTVELGNSYIHPGARGTGLNGRVKRLMLDHAFSVGFRRVEFRIDERNGRSQAAVAKLGCTKEGVLRAERITWT
GHVRDTGLWSILAEEWTG

Specific function: Unknown

COG id: COG1670

COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19772; Mature: 19772

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDRLYVELTEGDLRLVKLAEAHREALRAACAADGDVWPIYSSSYDPDHFDASFTALIGH
CCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEEEEC
ESRMPYAVIEGEALVGMTAWLRPDVSAQTVELGNSYIHPGARGTGLNGRVKRLMLDHAFS
CCCCCEEEECCCEEEEEEECCCCCCCCEEEECCCCEECCCCCCCCCCHHHHHHHHHHHHH
VGFRRVEFRIDERNGRSQAAVAKLGCTKEGVLRAERITWTGHVRDTGLWSILAEEWTG
CCEEEEEEEEECCCCCCHHHHHHHCCCHHHCEEEEEEEEECCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MLDRLYVELTEGDLRLVKLAEAHREALRAACAADGDVWPIYSSSYDPDHFDASFTALIGH
CCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEEEEC
ESRMPYAVIEGEALVGMTAWLRPDVSAQTVELGNSYIHPGARGTGLNGRVKRLMLDHAFS
CCCCCEEEECCCEEEEEEECCCCCCCCEEEECCCCEECCCCCCCCCCHHHHHHHHHHHHH
VGFRRVEFRIDERNGRSQAAVAKLGCTKEGVLRAERITWTGHVRDTGLWSILAEEWTG
CCEEEEEEEEECCCCCCHHHHHHHCCCHHHCEEEEEEEEECCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA