Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is 103486032
Identifier: 103486032
GI number: 103486032
Start: 553586
End: 554122
Strand: Direct
Name: 103486032
Synonym: Sala_0539
Alternate gene names: NA
Gene position: 553586-554122 (Clockwise)
Preceding gene: 103486031
Following gene: 103486033
Centisome position: 16.55
GC content: 66.29
Gene sequence:
>537_bases ATGCTTGACCGGCTCTATGTCGAGCTGACCGAGGGCGACCTTCGGCTCGTCAAGCTCGCCGAAGCACACCGCGAGGCGCT GCGCGCCGCTTGCGCCGCCGATGGCGACGTCTGGCCGATCTATTCGTCGAGTTACGATCCCGACCATTTCGACGCGAGTT TCACCGCGCTCATCGGCCATGAAAGCCGGATGCCTTATGCGGTCATCGAAGGCGAGGCGCTGGTCGGCATGACCGCGTGG CTGCGTCCCGATGTGTCGGCGCAGACGGTCGAGCTGGGTAACAGCTATATTCACCCCGGCGCGCGCGGCACCGGGCTCAA CGGCCGGGTCAAGCGGTTGATGCTCGATCACGCCTTTTCCGTCGGTTTTCGCCGCGTCGAGTTCCGCATCGACGAGCGGA ACGGCCGGTCGCAGGCAGCGGTCGCCAAGCTCGGCTGCACGAAGGAGGGCGTGTTGCGCGCCGAGCGCATCACCTGGACC GGGCATGTGCGCGACACCGGGCTGTGGTCGATCCTGGCGGAGGAGTGGACGGGATAA
Upstream 100 bases:
>100_bases GCGGTGGTCGAAGGCGCGCAGACCGAGATCGGCGGCAACGACCGCTATGTCGCGATGTGTCGGCGGCATTTCATGGAAAA GCGACGCGAGGCGGCCGCGG
Downstream 100 bases:
>100_bases CAGGCTTCGTCATTGCTTCGCTGCGCTCGCAATGACGAATGGCAGAGGGTCAGCCTTAGTTCAGACTCACCCGGCTATGG AAGGCGCCATGAAGAACCTC
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family; GNAT Family Acetyltransferase; Amino-Acid Acetyltransferase; Acetyltransferase/N-Acetylase; Acetyl Transferase; Acyl-CoA Acyltransferase Domain-Containing Protein; Acetyltransferase Gnat Family; GCN5-Like N-Acetyltransferase; Ribosomal Protein N-Acetylase; Ribosomal-Protein-Alanine Acetyltransferase; N-Acetyltransferase
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MLDRLYVELTEGDLRLVKLAEAHREALRAACAADGDVWPIYSSSYDPDHFDASFTALIGHESRMPYAVIEGEALVGMTAW LRPDVSAQTVELGNSYIHPGARGTGLNGRVKRLMLDHAFSVGFRRVEFRIDERNGRSQAAVAKLGCTKEGVLRAERITWT GHVRDTGLWSILAEEWTG
Sequences:
>Translated_178_residues MLDRLYVELTEGDLRLVKLAEAHREALRAACAADGDVWPIYSSSYDPDHFDASFTALIGHESRMPYAVIEGEALVGMTAW LRPDVSAQTVELGNSYIHPGARGTGLNGRVKRLMLDHAFSVGFRRVEFRIDERNGRSQAAVAKLGCTKEGVLRAERITWT GHVRDTGLWSILAEEWTG >Mature_178_residues MLDRLYVELTEGDLRLVKLAEAHREALRAACAADGDVWPIYSSSYDPDHFDASFTALIGHESRMPYAVIEGEALVGMTAW LRPDVSAQTVELGNSYIHPGARGTGLNGRVKRLMLDHAFSVGFRRVEFRIDERNGRSQAAVAKLGCTKEGVLRAERITWT GHVRDTGLWSILAEEWTG
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19772; Mature: 19772
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDRLYVELTEGDLRLVKLAEAHREALRAACAADGDVWPIYSSSYDPDHFDASFTALIGH CCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEEEEC ESRMPYAVIEGEALVGMTAWLRPDVSAQTVELGNSYIHPGARGTGLNGRVKRLMLDHAFS CCCCCEEEECCCEEEEEEECCCCCCCCEEEECCCCEECCCCCCCCCCHHHHHHHHHHHHH VGFRRVEFRIDERNGRSQAAVAKLGCTKEGVLRAERITWTGHVRDTGLWSILAEEWTG CCEEEEEEEEECCCCCCHHHHHHHCCCHHHCEEEEEEEEECCCCCCHHHHHHHHHCCC >Mature Secondary Structure MLDRLYVELTEGDLRLVKLAEAHREALRAACAADGDVWPIYSSSYDPDHFDASFTALIGH CCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEEEEC ESRMPYAVIEGEALVGMTAWLRPDVSAQTVELGNSYIHPGARGTGLNGRVKRLMLDHAFS CCCCCEEEECCCEEEEEEECCCCCCCCEEEECCCCEECCCCCCCCCCHHHHHHHHHHHHH VGFRRVEFRIDERNGRSQAAVAKLGCTKEGVLRAERITWTGHVRDTGLWSILAEEWTG CCEEEEEEEEECCCCCCHHHHHHHCCCHHHCEEEEEEEEECCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA