Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486033

Identifier: 103486033

GI number: 103486033

Start: 554154

End: 554615

Strand: Direct

Name: 103486033

Synonym: Sala_0540

Alternate gene names: NA

Gene position: 554154-554615 (Clockwise)

Preceding gene: 103486032

Following gene: 103486034

Centisome position: 16.57

GC content: 65.8

Gene sequence:

>462_bases
ATGACGAATGGCAGAGGGTCAGCCTTAGTTCAGACTCACCCGGCTATGGAAGGCGCCATGAAGAACCTCGCACTCTCCCT
GGCCGCTGCGCTCCTTCCCCTTTCGGTCGCGGCGGCCGACGAGCCCGTCAGGGAAGCGCGCGCGCTCGGCGTCGAATCGA
GCATTGTGTTCCCCAGCGACAGTTCGATCCGCAACTGGCGCGCTGACGATGGCCGCGGCGTCTGGATCCAGGACCGCCGC
GGCGACTGGTATTATGGCGCCTTTGCGGGCTATTGCCGCGACATCGACTTTGCGCACACGATCGGTGTCGAAACGCGCGG
CGCGGCGCGGCTCGACCGCTTTTCGGCGATCATCGTGCGCGGTGAGCGCTGCCCTCTCGCCTCCTTCGTGACCTCCGCGC
CGCCACCGTCGAAGCGGGACAAGTCGGAGGACATCATGGGCGAAAACCCGGCGGCAAATTGA

Upstream 100 bases:

>100_bases
ATCACCTGGACCGGGCATGTGCGCGACACCGGGCTGTGGTCGATCCTGGCGGAGGAGTGGACGGGATAACAGGCTTCGTC
ATTGCTTCGCTGCGCTCGCA

Downstream 100 bases:

>100_bases
CAAGCGCCGCCCGGCGCGCCTAGCGCCGCGGCGATGAACGGCTGGATCATCCTCGACAAACCCGTGGGGCTGGGCTCGAC
GCAGGCGGTCGGCGCGGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MTNGRGSALVQTHPAMEGAMKNLALSLAAALLPLSVAAADEPVREARALGVESSIVFPSDSSIRNWRADDGRGVWIQDRR
GDWYYGAFAGYCRDIDFAHTIGVETRGAARLDRFSAIIVRGERCPLASFVTSAPPPSKRDKSEDIMGENPAAN

Sequences:

>Translated_153_residues
MTNGRGSALVQTHPAMEGAMKNLALSLAAALLPLSVAAADEPVREARALGVESSIVFPSDSSIRNWRADDGRGVWIQDRR
GDWYYGAFAGYCRDIDFAHTIGVETRGAARLDRFSAIIVRGERCPLASFVTSAPPPSKRDKSEDIMGENPAAN
>Mature_152_residues
TNGRGSALVQTHPAMEGAMKNLALSLAAALLPLSVAAADEPVREARALGVESSIVFPSDSSIRNWRADDGRGVWIQDRRG
DWYYGAFAGYCRDIDFAHTIGVETRGAARLDRFSAIIVRGERCPLASFVTSAPPPSKRDKSEDIMGENPAAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16478; Mature: 16346

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNGRGSALVQTHPAMEGAMKNLALSLAAALLPLSVAAADEPVREARALGVESSIVFPSD
CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEECCCC
SSIRNWRADDGRGVWIQDRRGDWYYGAFAGYCRDIDFAHTIGVETRGAARLDRFSAIIVR
CCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHCCCCHHHCCCCCCCCHHHHHHEEEEEE
GERCPLASFVTSAPPPSKRDKSEDIMGENPAAN
CCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TNGRGSALVQTHPAMEGAMKNLALSLAAALLPLSVAAADEPVREARALGVESSIVFPSD
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEECCCC
SSIRNWRADDGRGVWIQDRRGDWYYGAFAGYCRDIDFAHTIGVETRGAARLDRFSAIIVR
CCCCCCCCCCCCEEEEECCCCCEEEHHHHHHHHCCCCHHHCCCCCCCCHHHHHHEEEEEE
GERCPLASFVTSAPPPSKRDKSEDIMGENPAAN
CCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA