Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485923

Identifier: 103485923

GI number: 103485923

Start: 436533

End: 438461

Strand: Direct

Name: 103485923

Synonym: Sala_0430

Alternate gene names: NA

Gene position: 436533-438461 (Clockwise)

Preceding gene: 103485922

Following gene: 103485924

Centisome position: 13.05

GC content: 64.96

Gene sequence:

>1929_bases
ATGACGGCAAGCTGGCTCGAAATGGTGGCGGAAAAGGCGGGCATGAGCCCGGCCGAAGCCGAGATAGCGCTTCGCAGACG
GGGCATTACGGCGGACCGTCCGATGCGCCCGGCGCGGACGCTCACCATCACAGCCATCGCGTTCAAGGGCGAGAAGGGCG
GCAAGGCGCAGGGTGCGATCGATTTCTGCTGGGAGGGCTTGAGGCCGGGCATCTGGGCGATCACCAGCGAGAAGAATTTT
GCCGGCAAGTCGAGCATCATCGAGATCATCCTGTGGTGCCTGCGCGGCACGCCCAAGGATCTGCAGGGCGATGTCCGCAA
ATGGCTGAGCTGGGTTGCCCTAGACTTTCTGGTCGATGCGCAGCCCTATCGGATCGAGTTCACCGTCGATGCCGGTGTTC
CAACCGGTACACTGATGCTTATCCGACCAAGTGGCGCGCCAACCATCGTCGATCACTTTTCGTCGGACGAGGGTTTTGCG
GCCGGCATGTCGCAGTTCATGATGAACACGCTCGACCTCGATCCCATTCCCGCGATGCAGGGCAAGGACGGCGACAAGAT
GGCGGTCGAACATGGCTGGACGGCGTTGTCGGGCGGGCTCTATTTCGGCGGCGACCACAAATTGCTTCTCGGTGACGTAC
AGATGGGTGGCCTGCCCGCGCGTATGCTGCAGATGTATGTGGGGCTCCCCTGGGCGCTGACGGTCATGCAGGCGCGCACC
GTCAAGAAGGAGGTCGAGCAGGAACAGGACCAGGGCAACAAGGCCGCGGCGCGCGCGGCGGAGGAAGCCGCCAAGGCACG
AACGCGCCTCGAGGCCGATCTCGCGGCGGCGCAGAAGACCCTGGCAGGGCTGAGTTCGACACAGGCAACGGCAAAAGAGC
TTGAGCGACTGGCAGGTGAAGTGGCCCGGCTTTCCCCGATCGCGATCGACCAGGCGAAACGCCACGCTACAGCGCAAGCC
GAGCTCAAGGCGCTGCGGGAGTTGGCCGATACCGATGAGCGGGCCCTGCGCAATTTGCGCGAGAATATCGTCGCTGAGCA
GTTCTTCAATGGACTGGAGCCGGTCTGCTGCCCGCGCTGCGAGGCGAAGGTGTCGGGCGAGCGCATCAAGCGGGAGAGCG
TCGATCTCAACTGCTCGCTTTGCGCCGAGCACATCCCGGTCGAAACCATGGAGGGGGTGAGCGAGACCATCGAGGCCGGC
GAAAGGCGGGCACAAGCCTCGAGGGCCGCCGTGGAGCGGGCCGTCGCCCACGAATCTGCGCTGCGCCGGCTTGCCGAAGA
TGCGAGCAAGGCGGTCGATGCAGCGCGCGCAGCGCTGGAGAAAGCGGCGACGGGGATAACCTTCCAGCAGCGGCGGGAGG
CAGAGCTAGCCGTTGCGCGGCTCGAGGGAGCGCTCAAGGAGCGCAAGATCGACGGGGTGGCTCCGACGCCCTCTCCTGAT
CTTGCGCTCGTGCGGGCTGCCACCAAAGAAGCCGAGACCGCCTATGACCAGAGCCGCGGCGACATATTGCAACGGCTGAG
CGAGGAGATCCTCACATTGGGGCAGCGCCTCGGCGTCAGAATGCTCGAGGGCGTCAAACTAGGATCGAACGCGACGCTGG
CCCTTACCAAAGGCGGCGAAAGCACCAGCTTCAGCAAGGTCACTGCGGGCGAACGATTGCGGTTGCGGCTCGCGACGGCG
GTTGCCTTGTTGCGCGTCGCCCAAGAGCGCGGCCTTGGGCGCCATCCGGGGCTCCTGATCATCGACTCGCCGGGCGCCGA
GGAGGTCAGCGATATCGATCTGGCCGCGCTGCTGGGGGAATTGCAGACGATCGCGAAGGAGACGCCGGGCCTCCAGATCC
TCGTAGCGAGCGCCAATCCGCCGGCGATCGTCAGTCAGCTCGGCGAGGACCGGTGCCGGATTGCGGAGAAGGATGCATAT
CTGTGGTGA

Upstream 100 bases:

>100_bases
TCCAGGCTGAATATGCCGGGACGGAACTCAACCATATCATCGCGCCGATCACCGAGCGCGTGCGCAAAAGGCTGGACGCC
ATATTGGAAAGGGCCGGACG

Downstream 100 bases:

>100_bases
TCGCGCACGCGAGCGTCGCGGCGTGACGGTCATCGACGCGATATCCAGATGCCTCGCGCAAGGAGAGGTCGTGACGCTGG
AGCGAATTGGCGGCGCCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 642; Mature: 641

Protein sequence:

>642_residues
MTASWLEMVAEKAGMSPAEAEIALRRRGITADRPMRPARTLTITAIAFKGEKGGKAQGAIDFCWEGLRPGIWAITSEKNF
AGKSSIIEIILWCLRGTPKDLQGDVRKWLSWVALDFLVDAQPYRIEFTVDAGVPTGTLMLIRPSGAPTIVDHFSSDEGFA
AGMSQFMMNTLDLDPIPAMQGKDGDKMAVEHGWTALSGGLYFGGDHKLLLGDVQMGGLPARMLQMYVGLPWALTVMQART
VKKEVEQEQDQGNKAAARAAEEAAKARTRLEADLAAAQKTLAGLSSTQATAKELERLAGEVARLSPIAIDQAKRHATAQA
ELKALRELADTDERALRNLRENIVAEQFFNGLEPVCCPRCEAKVSGERIKRESVDLNCSLCAEHIPVETMEGVSETIEAG
ERRAQASRAAVERAVAHESALRRLAEDASKAVDAARAALEKAATGITFQQRREAELAVARLEGALKERKIDGVAPTPSPD
LALVRAATKEAETAYDQSRGDILQRLSEEILTLGQRLGVRMLEGVKLGSNATLALTKGGESTSFSKVTAGERLRLRLATA
VALLRVAQERGLGRHPGLLIIDSPGAEEVSDIDLAALLGELQTIAKETPGLQILVASANPPAIVSQLGEDRCRIAEKDAY
LW

Sequences:

>Translated_642_residues
MTASWLEMVAEKAGMSPAEAEIALRRRGITADRPMRPARTLTITAIAFKGEKGGKAQGAIDFCWEGLRPGIWAITSEKNF
AGKSSIIEIILWCLRGTPKDLQGDVRKWLSWVALDFLVDAQPYRIEFTVDAGVPTGTLMLIRPSGAPTIVDHFSSDEGFA
AGMSQFMMNTLDLDPIPAMQGKDGDKMAVEHGWTALSGGLYFGGDHKLLLGDVQMGGLPARMLQMYVGLPWALTVMQART
VKKEVEQEQDQGNKAAARAAEEAAKARTRLEADLAAAQKTLAGLSSTQATAKELERLAGEVARLSPIAIDQAKRHATAQA
ELKALRELADTDERALRNLRENIVAEQFFNGLEPVCCPRCEAKVSGERIKRESVDLNCSLCAEHIPVETMEGVSETIEAG
ERRAQASRAAVERAVAHESALRRLAEDASKAVDAARAALEKAATGITFQQRREAELAVARLEGALKERKIDGVAPTPSPD
LALVRAATKEAETAYDQSRGDILQRLSEEILTLGQRLGVRMLEGVKLGSNATLALTKGGESTSFSKVTAGERLRLRLATA
VALLRVAQERGLGRHPGLLIIDSPGAEEVSDIDLAALLGELQTIAKETPGLQILVASANPPAIVSQLGEDRCRIAEKDAY
LW
>Mature_641_residues
TASWLEMVAEKAGMSPAEAEIALRRRGITADRPMRPARTLTITAIAFKGEKGGKAQGAIDFCWEGLRPGIWAITSEKNFA
GKSSIIEIILWCLRGTPKDLQGDVRKWLSWVALDFLVDAQPYRIEFTVDAGVPTGTLMLIRPSGAPTIVDHFSSDEGFAA
GMSQFMMNTLDLDPIPAMQGKDGDKMAVEHGWTALSGGLYFGGDHKLLLGDVQMGGLPARMLQMYVGLPWALTVMQARTV
KKEVEQEQDQGNKAAARAAEEAAKARTRLEADLAAAQKTLAGLSSTQATAKELERLAGEVARLSPIAIDQAKRHATAQAE
LKALRELADTDERALRNLRENIVAEQFFNGLEPVCCPRCEAKVSGERIKRESVDLNCSLCAEHIPVETMEGVSETIEAGE
RRAQASRAAVERAVAHESALRRLAEDASKAVDAARAALEKAATGITFQQRREAELAVARLEGALKERKIDGVAPTPSPDL
ALVRAATKEAETAYDQSRGDILQRLSEEILTLGQRLGVRMLEGVKLGSNATLALTKGGESTSFSKVTAGERLRLRLATAV
ALLRVAQERGLGRHPGLLIIDSPGAEEVSDIDLAALLGELQTIAKETPGLQILVASANPPAIVSQLGEDRCRIAEKDAYL
W

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69233; Mature: 69102

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASWLEMVAEKAGMSPAEAEIALRRRGITADRPMRPARTLTITAIAFKGEKGGKAQGAI
CCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCHH
DFCWEGLRPGIWAITSEKNFAGKSSIIEIILWCLRGTPKDLQGDVRKWLSWVALDFLVDA
HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
QPYRIEFTVDAGVPTGTLMLIRPSGAPTIVDHFSSDEGFAAGMSQFMMNTLDLDPIPAMQ
CCEEEEEEEECCCCCCEEEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
GKDGDKMAVEHGWTALSGGLYFGGDHKLLLGDVQMGGLPARMLQMYVGLPWALTVMQART
CCCCCCEEHHCCCEEECCCEEECCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHH
VKKEVEQEQDQGNKAAARAAEEAAKARTRLEADLAAAQKTLAGLSSTQATAKELERLAGE
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
VARLSPIAIDQAKRHATAQAELKALRELADTDERALRNLRENIVAEQFFNGLEPVCCPRC
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
EAKVSGERIKRESVDLNCSLCAEHIPVETMEGVSETIEAGERRAQASRAAVERAVAHESA
CCCCCHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRRLAEDASKAVDAARAALEKAATGITFQQRREAELAVARLEGALKERKIDGVAPTPSPD
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LALVRAATKEAETAYDQSRGDILQRLSEEILTLGQRLGVRMLEGVKLGSNATLALTKGGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCEEECCCCEEEEECCCC
STSFSKVTAGERLRLRLATAVALLRVAQERGLGRHPGLLIIDSPGAEEVSDIDLAALLGE
CCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH
LQTIAKETPGLQILVASANPPAIVSQLGEDRCRIAEKDAYLW
HHHHHHCCCCCEEEEECCCCCHHHHHCCHHHHHEECCCCCCC
>Mature Secondary Structure 
TASWLEMVAEKAGMSPAEAEIALRRRGITADRPMRPARTLTITAIAFKGEKGGKAQGAI
CHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCHH
DFCWEGLRPGIWAITSEKNFAGKSSIIEIILWCLRGTPKDLQGDVRKWLSWVALDFLVDA
HHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
QPYRIEFTVDAGVPTGTLMLIRPSGAPTIVDHFSSDEGFAAGMSQFMMNTLDLDPIPAMQ
CCEEEEEEEECCCCCCEEEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
GKDGDKMAVEHGWTALSGGLYFGGDHKLLLGDVQMGGLPARMLQMYVGLPWALTVMQART
CCCCCCEEHHCCCEEECCCEEECCCCEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHH
VKKEVEQEQDQGNKAAARAAEEAAKARTRLEADLAAAQKTLAGLSSTQATAKELERLAGE
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
VARLSPIAIDQAKRHATAQAELKALRELADTDERALRNLRENIVAEQFFNGLEPVCCPRC
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
EAKVSGERIKRESVDLNCSLCAEHIPVETMEGVSETIEAGERRAQASRAAVERAVAHESA
CCCCCHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRRLAEDASKAVDAARAALEKAATGITFQQRREAELAVARLEGALKERKIDGVAPTPSPD
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LALVRAATKEAETAYDQSRGDILQRLSEEILTLGQRLGVRMLEGVKLGSNATLALTKGGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCEEECCCCEEEEECCCC
STSFSKVTAGERLRLRLATAVALLRVAQERGLGRHPGLLIIDSPGAEEVSDIDLAALLGE
CCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH
LQTIAKETPGLQILVASANPPAIVSQLGEDRCRIAEKDAYLW
HHHHHHCCCCCEEEEECCCCCHHHHHCCHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA