Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is 103485909
Identifier: 103485909
GI number: 103485909
Start: 424080
End: 424355
Strand: Direct
Name: 103485909
Synonym: Sala_0416
Alternate gene names: NA
Gene position: 424080-424355 (Clockwise)
Preceding gene: 103485907
Following gene: 103485910
Centisome position: 12.68
GC content: 60.14
Gene sequence:
>276_bases ATGAAGACGACGAGAAAGCGCTACAGCGCGGATTTCAAAGCCAAGGTGGCGCTGGAGGCGATCCGGGGCGACCTGACGCT GGCGGAGCTGGCAGCCAAGCATGGCGTGCATCACACGATGATCGCATCGTGGAAACGCCAGGCCATCGATGGGATGGCAG GCACCTTCTCCGGGGCCGGCGATGCGGCTAAGGTTATCAGCGAGAGCGAGGTAGAGAAACTGCACGCCAAGATTGGGCAA CTGGTGGTGGAGCTGTTGATTTGCGCTGAGAACTGA
Upstream 100 bases:
>100_bases CACGCAGGGCGCGACGAACGATATCGATACCGGACTGAGGTGGTGCCGGTTTTCTGGACAGGATGCTAAGCTAATCCCGA CCTGATGGATTGGTACGGGA
Downstream 100 bases:
>100_bases CCCGGGAGGGGCAGAAATTTTCACTGAGAATTGACCCATGTTTTCCTCGCCCCCGGCAGGCAGTCGGGAGGCATCGGAGT GATCGACATGGACCTACTCA
Product: transposase IS3/IS911
Products: NA
Alternate protein names: Transposase IS3/IS; Transposase InsN For Insertion Sequence Element IS; Transposase Subfamily; Transposase IS3 Family Protein; Transposase IS3 Family
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MKTTRKRYSADFKAKVALEAIRGDLTLAELAAKHGVHHTMIASWKRQAIDGMAGTFSGAGDAAKVISESEVEKLHAKIGQ LVVELLICAEN
Sequences:
>Translated_91_residues MKTTRKRYSADFKAKVALEAIRGDLTLAELAAKHGVHHTMIASWKRQAIDGMAGTFSGAGDAAKVISESEVEKLHAKIGQ LVVELLICAEN >Mature_91_residues MKTTRKRYSADFKAKVALEAIRGDLTLAELAAKHGVHHTMIASWKRQAIDGMAGTFSGAGDAAKVISESEVEKLHAKIGQ LVVELLICAEN
Specific function: Unknown
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9805; Mature: 9805
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTRKRYSADFKAKVALEAIRGDLTLAELAAKHGVHHTMIASWKRQAIDGMAGTFSGAG CCCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC DAAKVISESEVEKLHAKIGQLVVELLICAEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTTRKRYSADFKAKVALEAIRGDLTLAELAAKHGVHHTMIASWKRQAIDGMAGTFSGAG CCCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC DAAKVISESEVEKLHAKIGQLVVELLICAEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA