Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485907

Identifier: 103485907

GI number: 103485907

Start: 423120

End: 423605

Strand: Direct

Name: 103485907

Synonym: Sala_0414

Alternate gene names: NA

Gene position: 423120-423605 (Clockwise)

Preceding gene: 103485906

Following gene: 103485909

Centisome position: 12.65

GC content: 53.09

Gene sequence:

>486_bases
ATGCTCGCGAATTTTCTGAGATTGCGCAAAATGACACGTGCAGAATGGTCTGCGATGTCCTTTTACGAGAAATTCGAGGA
CGCGATTGTCATCGTTCTCAGCGGAATAATCGCAATCGTCGTGATTGCGGCGGTTTGGTCATTGCTGCGCGAAGTTGTCA
CAAGCCTTGTCTTGGGCGCTCTTGATCCGCTCGATTTTGCCACTTTCCAGACTGTCTTCGGAATGATTTTTACTGCTGTG
ATTGCGCTTGAGTTCAAGCGTTCATTGCTCGTAGCTGCCGATAGGGGATTCGGTGTCCTGCAGGTGCGAACGATTATCCT
GATTGCGCTGCTGGCAATTGTGCGCAAGTTCATCATTCTCAATCTGGCAGACACGAGCGCCGCGAAGGTCGCCGCGCTTT
CGGGGGCTGTGCTGGCACTTGGTGCGGTATTCTGGCTCGTTCGCGATCAGGATCGGCAGGAGCGGCTTGAGCAAGCACAG
GAATAG

Upstream 100 bases:

>100_bases
GGCTCCCGAAAGATGGCCCTGCCCCTCCGCTGAACATCCGGCTTGGACAAACCGAGGCTGCGGTGAAGAATGCTTGAAAG
ACGACCGCAAGGATAAACCA

Downstream 100 bases:

>100_bases
GGCTGGTCTAAAGCCGTAGCAAGCGCGGTTACAGACAGAAAAAGACAGGTACACCCGTGCGAGCGCGCCTGTCCGGCTTC
CAGGAGAAATGCTGTCTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MLANFLRLRKMTRAEWSAMSFYEKFEDAIVIVLSGIIAIVVIAAVWSLLREVVTSLVLGALDPLDFATFQTVFGMIFTAV
IALEFKRSLLVAADRGFGVLQVRTIILIALLAIVRKFIILNLADTSAAKVAALSGAVLALGAVFWLVRDQDRQERLEQAQ
E

Sequences:

>Translated_161_residues
MLANFLRLRKMTRAEWSAMSFYEKFEDAIVIVLSGIIAIVVIAAVWSLLREVVTSLVLGALDPLDFATFQTVFGMIFTAV
IALEFKRSLLVAADRGFGVLQVRTIILIALLAIVRKFIILNLADTSAAKVAALSGAVLALGAVFWLVRDQDRQERLEQAQ
E
>Mature_161_residues
MLANFLRLRKMTRAEWSAMSFYEKFEDAIVIVLSGIIAIVVIAAVWSLLREVVTSLVLGALDPLDFATFQTVFGMIFTAV
IALEFKRSLLVAADRGFGVLQVRTIILIALLAIVRKFIILNLADTSAAKVAALSGAVLALGAVFWLVRDQDRQERLEQAQ
E

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17769; Mature: 17769

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLANFLRLRKMTRAEWSAMSFYEKFEDAIVIVLSGIIAIVVIAAVWSLLREVVTSLVLGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LDPLDFATFQTVFGMIFTAVIALEFKRSLLVAADRGFGVLQVRTIILIALLAIVRKFIIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NLADTSAAKVAALSGAVLALGAVFWLVRDQDRQERLEQAQE
HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MLANFLRLRKMTRAEWSAMSFYEKFEDAIVIVLSGIIAIVVIAAVWSLLREVVTSLVLGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LDPLDFATFQTVFGMIFTAVIALEFKRSLLVAADRGFGVLQVRTIILIALLAIVRKFIIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NLADTSAAKVAALSGAVLALGAVFWLVRDQDRQERLEQAQE
HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA