Definition | Sphingopyxis alaskensis RB2256, complete genome. |
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Accession | NC_008048 |
Length | 3,345,170 |
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The map label for this gene is 103485907
Identifier: 103485907
GI number: 103485907
Start: 423120
End: 423605
Strand: Direct
Name: 103485907
Synonym: Sala_0414
Alternate gene names: NA
Gene position: 423120-423605 (Clockwise)
Preceding gene: 103485906
Following gene: 103485909
Centisome position: 12.65
GC content: 53.09
Gene sequence:
>486_bases ATGCTCGCGAATTTTCTGAGATTGCGCAAAATGACACGTGCAGAATGGTCTGCGATGTCCTTTTACGAGAAATTCGAGGA CGCGATTGTCATCGTTCTCAGCGGAATAATCGCAATCGTCGTGATTGCGGCGGTTTGGTCATTGCTGCGCGAAGTTGTCA CAAGCCTTGTCTTGGGCGCTCTTGATCCGCTCGATTTTGCCACTTTCCAGACTGTCTTCGGAATGATTTTTACTGCTGTG ATTGCGCTTGAGTTCAAGCGTTCATTGCTCGTAGCTGCCGATAGGGGATTCGGTGTCCTGCAGGTGCGAACGATTATCCT GATTGCGCTGCTGGCAATTGTGCGCAAGTTCATCATTCTCAATCTGGCAGACACGAGCGCCGCGAAGGTCGCCGCGCTTT CGGGGGCTGTGCTGGCACTTGGTGCGGTATTCTGGCTCGTTCGCGATCAGGATCGGCAGGAGCGGCTTGAGCAAGCACAG GAATAG
Upstream 100 bases:
>100_bases GGCTCCCGAAAGATGGCCCTGCCCCTCCGCTGAACATCCGGCTTGGACAAACCGAGGCTGCGGTGAAGAATGCTTGAAAG ACGACCGCAAGGATAAACCA
Downstream 100 bases:
>100_bases GGCTGGTCTAAAGCCGTAGCAAGCGCGGTTACAGACAGAAAAAGACAGGTACACCCGTGCGAGCGCGCCTGTCCGGCTTC CAGGAGAAATGCTGTCTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MLANFLRLRKMTRAEWSAMSFYEKFEDAIVIVLSGIIAIVVIAAVWSLLREVVTSLVLGALDPLDFATFQTVFGMIFTAV IALEFKRSLLVAADRGFGVLQVRTIILIALLAIVRKFIILNLADTSAAKVAALSGAVLALGAVFWLVRDQDRQERLEQAQ E
Sequences:
>Translated_161_residues MLANFLRLRKMTRAEWSAMSFYEKFEDAIVIVLSGIIAIVVIAAVWSLLREVVTSLVLGALDPLDFATFQTVFGMIFTAV IALEFKRSLLVAADRGFGVLQVRTIILIALLAIVRKFIILNLADTSAAKVAALSGAVLALGAVFWLVRDQDRQERLEQAQ E >Mature_161_residues MLANFLRLRKMTRAEWSAMSFYEKFEDAIVIVLSGIIAIVVIAAVWSLLREVVTSLVLGALDPLDFATFQTVFGMIFTAV IALEFKRSLLVAADRGFGVLQVRTIILIALLAIVRKFIILNLADTSAAKVAALSGAVLALGAVFWLVRDQDRQERLEQAQ E
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17769; Mature: 17769
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLANFLRLRKMTRAEWSAMSFYEKFEDAIVIVLSGIIAIVVIAAVWSLLREVVTSLVLGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LDPLDFATFQTVFGMIFTAVIALEFKRSLLVAADRGFGVLQVRTIILIALLAIVRKFIIL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH NLADTSAAKVAALSGAVLALGAVFWLVRDQDRQERLEQAQE HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure MLANFLRLRKMTRAEWSAMSFYEKFEDAIVIVLSGIIAIVVIAAVWSLLREVVTSLVLGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LDPLDFATFQTVFGMIFTAVIALEFKRSLLVAADRGFGVLQVRTIILIALLAIVRKFIIL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH NLADTSAAKVAALSGAVLALGAVFWLVRDQDRQERLEQAQE HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA