Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485819

Identifier: 103485819

GI number: 103485819

Start: 331114

End: 331596

Strand: Direct

Name: 103485819

Synonym: Sala_0324

Alternate gene names: NA

Gene position: 331114-331596 (Clockwise)

Preceding gene: 103485818

Following gene: 103485820

Centisome position: 9.9

GC content: 69.36

Gene sequence:

>483_bases
ATGACGGAGCGGCTGAAATACTGGTGGGCGGGATTGTCGGGGCGCGAACGCTGGCTGGTCGGTATCGCCGCGGTGCTGGC
GCTCGGTGTGCTCGGCTGGGGGTTGGGACGGCCCGCGGTGGCCGCCTTCATCGACCTGGAGAACCGCCACCGCGCCGCGA
TCGAGCGCGAGGGGCGCGTTGCGGCGAAGGTCGCGCTGCTTGGCGCGCGGCCGCAAAAATCGGTCGCGGCGAGTGCCGAC
GCGGGCGCGATCGACCAGTTTCTACAGCAATCGGCGGGCGAGATCGGGCTGACGCTCGACCGCAACGAAGCGCGCGGCAC
CAATCGGGCAGCGATTGCGATTGCGACGGCGAAAGCGCCGGTGCTGACCGACTGGCTCGCGTCGCTCGAAGCGCAGGGCT
TTGTCATCGACCAGCTCACCATCACCCCCGCCGCCGACGGCACGGTCGGGATGACGGCGGAACTCAGAAAGGGCGGACAA
TGA

Upstream 100 bases:

>100_bases
TGCTGCTGGCGTTGCAGGCGCGTGGCTATCGCATCACGGCGCAGCCGATGGCGGGGGCCGGCGGACAGCAGATGGCCCAT
GTCACGATCCGGGCGGTGCC

Downstream 100 bases:

>100_bases
GCGTGCGGCGGCGCTGGATCGTTGCGGCGGCGCTGCTGGCGCTCGTCCTGCTTGTCGCGACCTTTCCGATGCGCCTCGCG
CTCGGCTGGTCGGGGGCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MTERLKYWWAGLSGRERWLVGIAAVLALGVLGWGLGRPAVAAFIDLENRHRAAIEREGRVAAKVALLGARPQKSVAASAD
AGAIDQFLQQSAGEIGLTLDRNEARGTNRAAIAIATAKAPVLTDWLASLEAQGFVIDQLTITPAADGTVGMTAELRKGGQ

Sequences:

>Translated_160_residues
MTERLKYWWAGLSGRERWLVGIAAVLALGVLGWGLGRPAVAAFIDLENRHRAAIEREGRVAAKVALLGARPQKSVAASAD
AGAIDQFLQQSAGEIGLTLDRNEARGTNRAAIAIATAKAPVLTDWLASLEAQGFVIDQLTITPAADGTVGMTAELRKGGQ
>Mature_159_residues
TERLKYWWAGLSGRERWLVGIAAVLALGVLGWGLGRPAVAAFIDLENRHRAAIEREGRVAAKVALLGARPQKSVAASADA
GAIDQFLQQSAGEIGLTLDRNEARGTNRAAIAIATAKAPVLTDWLASLEAQGFVIDQLTITPAADGTVGMTAELRKGGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16842; Mature: 16711

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTERLKYWWAGLSGRERWLVGIAAVLALGVLGWGLGRPAVAAFIDLENRHRAAIEREGRV
CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCHHHHHHHCCCC
AAKVALLGARPQKSVAASADAGAIDQFLQQSAGEIGLTLDRNEARGTNRAAIAIATAKAP
EEEEEEECCCCCHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEECCCC
VLTDWLASLEAQGFVIDQLTITPAADGTVGMTAELRKGGQ
HHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure 
TERLKYWWAGLSGRERWLVGIAAVLALGVLGWGLGRPAVAAFIDLENRHRAAIEREGRV
CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECCCCHHHHHHHCCCC
AAKVALLGARPQKSVAASADAGAIDQFLQQSAGEIGLTLDRNEARGTNRAAIAIATAKAP
EEEEEEECCCCCHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEECCCC
VLTDWLASLEAQGFVIDQLTITPAADGTVGMTAELRKGGQ
HHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA