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The map label for this gene is xcpW [H]

Identifier: 103485816

GI number: 103485816

Start: 328358

End: 328969

Strand: Direct

Name: xcpW [H]

Synonym: Sala_0321

Alternate gene names: 103485816

Gene position: 328358-328969 (Clockwise)

Preceding gene: 103485815

Following gene: 103485817

Centisome position: 9.82

GC content: 73.2

Gene sequence:

>612_bases
ATGACCGATCAGCGCGGCTTCACCCTGGTCGAGATGCTCGTCGCGCTGTCGCTGTTCGCGGCGATTGCGGCGATCGGGGT
CGGCCTGCTGCGCAGCAGCATCGACACGCAGGACGCGGTGCAGGAACGGCTGAAGGGCATGAGCGGGATGAACCGCGTGC
GCGCGATCATGGCGAATGATCTGGCGCAGGCGGTGCAGCGGCCGACGCGCGGTGCGGCGGGGGAGGCGGTGCCAGCGTTC
GTCGGATCCAGCAATGGCTTTGCCTTTGTCCACGCCGGTGCGGCGGCGTTTGACGGCAGCCCGCGCCCCGCGGTCGCGCG
CGTCGGCTATGCGCGCGTCGGCAGCGAATGGCGGCGCGCGACGCAGCCGATGCTCGACGGCACCGCGCTGGGCGAGGGCG
ACCGGTTGCTGGACGCGGTGACGGCGGCGCGGGTGCGCTATCGCGACGAGGCTGGGCGCTGGAGCGAGAGCTGGACGTCG
GAGCCGGGCGACCGCCTGCCGCGCGCGGTCGAGGTGCGGATCGACCGAACGGGCCGCCCGCCGCTGACGATGCTGTTCCT
CACCGCGCCGACGCCATTGCCGCCGCCCGCCATCGCGGGAGAGGCGCCATGA

Upstream 100 bases:

>100_bases
TGACGAAAACCGCCGACGCGGCGCTGCTGCGTATCGACCTGCTCGTCCGGCCCGAAAGCGGCAGCGGGCAGGCGGCGCTG
ACGATCATCCGGCCCGCGCG

Downstream 100 bases:

>100_bases
CCCCGGCACCGGGCGATCGCGGCGCGGCTTTGCTGAGCGTCCTGCTGCTCGTCGCGGTGATGGCGGTGATCGCGGCGACC
GCGCTCGACCGGCTGACGCT

Product: general secretion pathway protein J

Products: NA

Alternate protein names: PilD-dependent protein pddD [H]

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MTDQRGFTLVEMLVALSLFAAIAAIGVGLLRSSIDTQDAVQERLKGMSGMNRVRAIMANDLAQAVQRPTRGAAGEAVPAF
VGSSNGFAFVHAGAAAFDGSPRPAVARVGYARVGSEWRRATQPMLDGTALGEGDRLLDAVTAARVRYRDEAGRWSESWTS
EPGDRLPRAVEVRIDRTGRPPLTMLFLTAPTPLPPPAIAGEAP

Sequences:

>Translated_203_residues
MTDQRGFTLVEMLVALSLFAAIAAIGVGLLRSSIDTQDAVQERLKGMSGMNRVRAIMANDLAQAVQRPTRGAAGEAVPAF
VGSSNGFAFVHAGAAAFDGSPRPAVARVGYARVGSEWRRATQPMLDGTALGEGDRLLDAVTAARVRYRDEAGRWSESWTS
EPGDRLPRAVEVRIDRTGRPPLTMLFLTAPTPLPPPAIAGEAP
>Mature_202_residues
TDQRGFTLVEMLVALSLFAAIAAIGVGLLRSSIDTQDAVQERLKGMSGMNRVRAIMANDLAQAVQRPTRGAAGEAVPAFV
GSSNGFAFVHAGAAAFDGSPRPAVARVGYARVGSEWRRATQPMLDGTALGEGDRLLDAVTAARVRYRDEAGRWSESWTSE
PGDRLPRAVEVRIDRTGRPPLTMLFLTAPTPLPPPAIAGEAP

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]

COG id: COG4795

COG function: function code U; Type II secretory pathway, component PulJ

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP J family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010055
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 21525; Mature: 21394

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQRGFTLVEMLVALSLFAAIAAIGVGLLRSSIDTQDAVQERLKGMSGMNRVRAIMAND
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAQAVQRPTRGAAGEAVPAFVGSSNGFAFVHAGAAAFDGSPRPAVARVGYARVGSEWRRA
HHHHHHCCCCCCCCCCCHHEECCCCCEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHH
TQPMLDGTALGEGDRLLDAVTAARVRYRDEAGRWSESWTSEPGDRLPRAVEVRIDRTGRP
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHCCCEEEEEECCCCCC
PLTMLFLTAPTPLPPPAIAGEAP
CEEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDQRGFTLVEMLVALSLFAAIAAIGVGLLRSSIDTQDAVQERLKGMSGMNRVRAIMAND
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAQAVQRPTRGAAGEAVPAFVGSSNGFAFVHAGAAAFDGSPRPAVARVGYARVGSEWRRA
HHHHHHCCCCCCCCCCCHHEECCCCCEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHH
TQPMLDGTALGEGDRLLDAVTAARVRYRDEAGRWSESWTSEPGDRLPRAVEVRIDRTGRP
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHCCCEEEEEECCCCCC
PLTMLFLTAPTPLPPPAIAGEAP
CEEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1588814; 1309616; 10984043 [H]