Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485718

Identifier: 103485718

GI number: 103485718

Start: 231217

End: 231849

Strand: Direct

Name: 103485718

Synonym: Sala_0222

Alternate gene names: NA

Gene position: 231217-231849 (Clockwise)

Preceding gene: 103485717

Following gene: 103485719

Centisome position: 6.91

GC content: 65.24

Gene sequence:

>633_bases
ATGACCGCCGCGCGCGTCGAGTTTTTCTTCGATCTATCCTCGCCCTGGACCTGCCTCGCCTTTCACAACCTGCCTGCCGT
GCTCGAACGGACAGGCGCGAGCGCGCTGTATCGGCCGATCCTCGTCGGCGGCGTGTTCAATGCGGTCAATCCCGCCGTCT
ATGCGGCGCGCGAGCAGACCGACAACCGGCGGCTCCAGCATAGCTGGAAGGTGCTGAAGGACTGGGCGCGCCTTGCCGAC
GTGCCGATGAATTTTCCCTCGCGATGGCATCCGGCAAAGAGCATCGCCGCGATGCGTTTCTGCTGCGCGATCGAAGCGGA
TCAGGCGGCGCTCGTCCGCTTTGCGCGCGGCGCCTTCGCGAGCTATTTCGACCGGCAGGAAAATCTCGACGACCCGGTGG
TGCTCGCGGCGGTCGCCGATGCCGAGGGGCTCGACGGCGCCGCGCTCGCCGCCGCGGCGGGGAGCGATGCGGTCAAGGCG
CGGCTGCGTGCGAACACCGATGAACTCATCGCGCGCGGCGGCTATGGTTCGCCGACGATCTTCGTCGATCGCGATGACAT
GTATTTCGGCAACGACCAGCTTCCGCTTGTCGAGGCGGCTCTAAAACATAAAACGCAGAGGACTCTCGCATGA

Upstream 100 bases:

>100_bases
GACTTCCTCGAAGCCTTGCCGCGCCATGACACGGGCAAGCTCTACAAACGCCTGCTTCGCGACCGATATTGGGAGAAGGC
GAAGGCGGAGGCCTGATGCA

Downstream 100 bases:

>100_bases
AGGACCGGATTTCGATCACCATGCTCGACGGCGGGATCGCCGACGTCCGGCTGATCCGCGCCGACAAGATGAATGCGCTC
GACAGCGCAATGTGGGAAGC

Product: DSBA oxidoreductase

Products: NA

Alternate protein names: Dsba Oxidoreductase; 2-Hydroxychromene-2-Carboxylate Isomerase; DSBA-Like Thioredoxin Domain Protein

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MTAARVEFFFDLSSPWTCLAFHNLPAVLERTGASALYRPILVGGVFNAVNPAVYAAREQTDNRRLQHSWKVLKDWARLAD
VPMNFPSRWHPAKSIAAMRFCCAIEADQAALVRFARGAFASYFDRQENLDDPVVLAAVADAEGLDGAALAAAAGSDAVKA
RLRANTDELIARGGYGSPTIFVDRDDMYFGNDQLPLVEAALKHKTQRTLA

Sequences:

>Translated_210_residues
MTAARVEFFFDLSSPWTCLAFHNLPAVLERTGASALYRPILVGGVFNAVNPAVYAAREQTDNRRLQHSWKVLKDWARLAD
VPMNFPSRWHPAKSIAAMRFCCAIEADQAALVRFARGAFASYFDRQENLDDPVVLAAVADAEGLDGAALAAAAGSDAVKA
RLRANTDELIARGGYGSPTIFVDRDDMYFGNDQLPLVEAALKHKTQRTLA
>Mature_209_residues
TAARVEFFFDLSSPWTCLAFHNLPAVLERTGASALYRPILVGGVFNAVNPAVYAAREQTDNRRLQHSWKVLKDWARLADV
PMNFPSRWHPAKSIAAMRFCCAIEADQAALVRFARGAFASYFDRQENLDDPVVLAAVADAEGLDGAALAAAAGSDAVKAR
LRANTDELIARGGYGSPTIFVDRDDMYFGNDQLPLVEAALKHKTQRTLA

Specific function: Unknown

COG id: COG3917

COG function: function code Q; 2-hydroxychromene-2-carboxylate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22987; Mature: 22856

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAARVEFFFDLSSPWTCLAFHNLPAVLERTGASALYRPILVGGVFNAVNPAVYAAREQT
CCCCEEEEEEECCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH
DNRRLQHSWKVLKDWARLADVPMNFPSRWHPAKSIAAMRFCCAIEADQAALVRFARGAFA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SYFDRQENLDDPVVLAAVADAEGLDGAALAAAAGSDAVKARLRANTDELIARGGYGSPTI
HHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHCCCHHHHHHHHCCHHHHHCCCCCCCCEE
FVDRDDMYFGNDQLPLVEAALKHKTQRTLA
EEECCCEEECCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TAARVEFFFDLSSPWTCLAFHNLPAVLERTGASALYRPILVGGVFNAVNPAVYAAREQT
CCCEEEEEEECCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH
DNRRLQHSWKVLKDWARLADVPMNFPSRWHPAKSIAAMRFCCAIEADQAALVRFARGAFA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
SYFDRQENLDDPVVLAAVADAEGLDGAALAAAAGSDAVKARLRANTDELIARGGYGSPTI
HHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHCCCHHHHHHHHCCHHHHHCCCCCCCCEE
FVDRDDMYFGNDQLPLVEAALKHKTQRTLA
EEECCCEEECCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA