Definition Agrobacterium vitis S4 plasmid pAtS4b, complete sequence.
Accession NC_011991
Length 130,435

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The map label for this gene is 222109192

Identifier: 222109192

GI number: 222109192

Start: 80698

End: 81372

Strand: Reverse

Name: 222109192

Synonym: Avi_9611

Alternate gene names: NA

Gene position: 81372-80698 (Counterclockwise)

Preceding gene: 222109193

Following gene: 222109191

Centisome position: 62.39

GC content: 48.89

Gene sequence:

>675_bases
ATGGAAGTCGCAGAAGGAGAATTCAAACCTGCCTTTCCTATCAAGCCTGCCCAGCAGCTGGTGTTCGTGCACATCCCCAA
ATGTGGTGGTACGTCAATGCACCAATTCTTAGCCAACGCGAAGAAGGTGCAGCCGGAACCAGAGCTTTCGACAATTCTTG
CGGGCTATTGTGAACCCGCGCTTCATAAACACTCTAAGGCGGCGGTTATTCGTGATCTCGTCGGCCCTGCGTTGTGGCAG
ACCATCTTCACTTTTTCAGTCGTGCGGAACCCGTGGGACCTAATGCTTTCGAGTTATCGTTGGTGGCTTCAAAAAGCCGG
CAGATTTTCAAGTCTGCGCGCACAAGCGGATGAGGTGGCGGATCTAGGAAGCTTCGAAGGTTTCCTAAAGTCTGATTTTG
GGGGCAATCGCATAAACGAGTGTGAAGGCGATATCCTAAGCTGGCTATCGGATGAGAATGGACAAGAGATTGTCGACTTT
GTAGGCCGACTTGAAGATATAGAGCAAGCATTACAAAATGTATTCGAACGCGCGGGGTTGGCCGGGTATTCTGAATTTCC
ACGACTTAACTCTACCGTTAGAGGTGGATACCAAGACTATTACAATGCAGAAACAAAGCGCTTAATACAAACCCGCTTCC
AAGCAACTATCGACCGCTTTGAATATCAGTTCTAA

Upstream 100 bases:

>100_bases
TCGGTTCCCGCGCTTTGCAACGAAGGCTTGGTGCGGAGCTTCAGAAACTGAGGTTTAGTTGTCGAATAAGCCGCTGCGAG
GGGCTGGAAAGGATAGCTTT

Downstream 100 bases:

>100_bases
ATAGACACCACGGAAATCTGATCATAAAAAAGAACCGATACCTTTGGAGTTCTAGTGAGCATGTCGTCCGAAGTGAGCTC
TGAAGGACTTTTCGGTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MEVAEGEFKPAFPIKPAQQLVFVHIPKCGGTSMHQFLANAKKVQPEPELSTILAGYCEPALHKHSKAAVIRDLVGPALWQ
TIFTFSVVRNPWDLMLSSYRWWLQKAGRFSSLRAQADEVADLGSFEGFLKSDFGGNRINECEGDILSWLSDENGQEIVDF
VGRLEDIEQALQNVFERAGLAGYSEFPRLNSTVRGGYQDYYNAETKRLIQTRFQATIDRFEYQF

Sequences:

>Translated_224_residues
MEVAEGEFKPAFPIKPAQQLVFVHIPKCGGTSMHQFLANAKKVQPEPELSTILAGYCEPALHKHSKAAVIRDLVGPALWQ
TIFTFSVVRNPWDLMLSSYRWWLQKAGRFSSLRAQADEVADLGSFEGFLKSDFGGNRINECEGDILSWLSDENGQEIVDF
VGRLEDIEQALQNVFERAGLAGYSEFPRLNSTVRGGYQDYYNAETKRLIQTRFQATIDRFEYQF
>Mature_224_residues
MEVAEGEFKPAFPIKPAQQLVFVHIPKCGGTSMHQFLANAKKVQPEPELSTILAGYCEPALHKHSKAAVIRDLVGPALWQ
TIFTFSVVRNPWDLMLSSYRWWLQKAGRFSSLRAQADEVADLGSFEGFLKSDFGGNRINECEGDILSWLSDENGQEIVDF
VGRLEDIEQALQNVFERAGLAGYSEFPRLNSTVRGGYQDYYNAETKRLIQTRFQATIDRFEYQF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25423; Mature: 25423

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVAEGEFKPAFPIKPAQQLVFVHIPKCGGTSMHQFLANAKKVQPEPELSTILAGYCEPA
CCCCCCCCCCCCCCCHHHCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LHKHSKAAVIRDLVGPALWQTIFTFSVVRNPWDLMLSSYRWWLQKAGRFSSLRAQADEVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
DLGSFEGFLKSDFGGNRINECEGDILSWLSDENGQEIVDFVGRLEDIEQALQNVFERAGL
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
AGYSEFPRLNSTVRGGYQDYYNAETKRLIQTRFQATIDRFEYQF
CCCHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEVAEGEFKPAFPIKPAQQLVFVHIPKCGGTSMHQFLANAKKVQPEPELSTILAGYCEPA
CCCCCCCCCCCCCCCHHHCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LHKHSKAAVIRDLVGPALWQTIFTFSVVRNPWDLMLSSYRWWLQKAGRFSSLRAQADEVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
DLGSFEGFLKSDFGGNRINECEGDILSWLSDENGQEIVDFVGRLEDIEQALQNVFERAGL
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
AGYSEFPRLNSTVRGGYQDYYNAETKRLIQTRFQATIDRFEYQF
CCCHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA