Definition | Agrobacterium vitis S4 plasmid pAtS4b, complete sequence. |
---|---|
Accession | NC_011991 |
Length | 130,435 |
Click here to switch to the map view.
The map label for this gene is msbA [C]
Identifier: 222109191
GI number: 222109191
Start: 78790
End: 80637
Strand: Reverse
Name: msbA [C]
Synonym: Avi_9610
Alternate gene names: 222109191
Gene position: 80637-78790 (Counterclockwise)
Preceding gene: 222109192
Following gene: 222109190
Centisome position: 61.82
GC content: 49.57
Gene sequence:
>1848_bases ATGTCGTCCGAAGTGAGCTCTGAAGGACTTTTCGGTCGCCTCATCAACTGGCTGCAACAGCTTGTCGCTATAACGCCAGC CGTTGAAAATATTGTCCTCCCAGATCGGATTGGGAAGTTTTACTGCTTCTTTCTCATTCAAGCTTGGCGTCCCTTGTTAT GGCTCTTAGCTATTGGCACTGCAGTGGCGACCGCTGACGCCATCATCCCGGTCGCGATCAGCCATTTCGTCCAGTTACTC GGTGAAAATTCCACATCGTTTCCAACCTCAACAGTCGCGGTTATCGTCCTTTTTATGCTCGCGCACCCGCTGCTGACCAG CGCGCAAAGACTAATCGTCAATCACTCCATTTCCGCGAATATTGCTACGCTGGTTCGGTGGCAGAGTCATTCATACATCG CGCGTCAACCTATTTCATTTTTCAACAGTGATTTGACGGGAAAACTTGCGAATCGAGTATTACAGACGGGCCCGGCCCTG CGAGACACGATCGTCACCGTGGTGACCTCGGTGTGGTACATCGTCATCTTCATTGCGACCACGATATTTTTTTTGGCACA GGCTGATGTTCGCCTCATTGTGCCAACCCTAATTTGGGTGATCTCATACCTACTTCTTCTTAGAGTATTCCTTCCTCGGA TGAACCGTCATTCACGTGATATGTCCAGCATGAGGTCGCTCGTCTCAGGCCGCCTTGTAGATAGCTATTCGAATATTCAG ACGGTTAAGCTCTACTCCCATGACGGTTCGGAAAATAGCTACATAAAACACGGGCTGGTGACACACAATGAAGCAAACCA AAAGTTACTAGCTCAGAACAGTTTTTTTGGTACCGCTCTCTCGTTCATAAATGGGACGCTAATCAGCTCGACTTTGGCAT TGTCGCTATGGTTGTCAAAAAATCACGCGGTTGAACCAAGCCAATTCGCAATGATACTTCCGTTGGTGTGGCACATAGCC AACACTTCGACCGCAATAACCCAGCAGATGTCGTCAATCTTCGAGAATTTCGGTGTAGTACAGGAAGGGATGAGATCCAT AACCGCGCCGTTCCCTCCCGAAGACGGGTCTTGCTCAGAAGAGCTGAGGGTTCATGAACCGACTGTAGTTTTTCAAAACG TAACTTTTCGATACCCTCGCTCTTCAGCCGCGGTCGTAAGTTTGAATTTCTCCATTAATAGCCATGAGCGAGTCGCAATT GTGGGCTCCTCGGGCGCCGGTAAATCAACCATCATAGGCTTGCTGTTACGCCTATACGAGGCGGACCAGGGCACAGTATC CATCTGCGGTCAGGACATTCGCTCGGTCAGCGTACGTAGCCTGCGAGCTTCTATCGCAGTCGTATCTCAAGAAACATCTA TTCTAAACCGTTCTGTCTTTGACAACATTAGTTTTGGTATGCCTCACACGTCGGCATCTGAGGTCGTCGAAGCTGCGACA ATGGCTGGTGCCCATGAATTCATCCGCCAACTTAGGGACAAAGATGGCCGCGTTGGCTATGCAGCACACGCGGGCGAAAG GGGTGTAAAGTTTTCAGGTGGTCAACGGCAGCGCATTGCGATCGCGAGGGCTCTCCTTAAAAATTCCCCGATAATTGTGC TTGATGAAGCTACATCGGCTTTGGACTCAGAATCTGAATTTGAGCTGAAGAAACGCCTTGAACCGCTGCTGCGCCACAAG ACTGTTATCGCGATTGCTCATCGGCTCGGGACAATTAAGGACTTCGATAGGATCATCGTACTCGAAGGTGGGCGAATTGT CGAAATGGGTTCTCACGAACAATTATTACGCTCGGAGGGCAGATATGCTTTACTTTGGAACCGCCAAATTGAAGGCATAA GCAACTAG
Upstream 100 bases:
>100_bases CTTCCAAGCAACTATCGACCGCTTTGAATATCAGTTCTAAATAGACACCACGGAAATCTGATCATAAAAAAGAACCGATA CCTTTGGAGTTCTAGTGAGC
Downstream 100 bases:
>100_bases CCTTATTCGAGCTCGGTCCAACAATATATTCTCTAATACATTTCAGAATATTGCGCGAGCTTTAAGCCCGCGGCATGTAT TTTTTTGTATCAAGGGCTAT
Product: ABC transporter nucleotide binding/ATPase protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 615; Mature: 614
Protein sequence:
>615_residues MSSEVSSEGLFGRLINWLQQLVAITPAVENIVLPDRIGKFYCFFLIQAWRPLLWLLAIGTAVATADAIIPVAISHFVQLL GENSTSFPTSTVAVIVLFMLAHPLLTSAQRLIVNHSISANIATLVRWQSHSYIARQPISFFNSDLTGKLANRVLQTGPAL RDTIVTVVTSVWYIVIFIATTIFFLAQADVRLIVPTLIWVISYLLLLRVFLPRMNRHSRDMSSMRSLVSGRLVDSYSNIQ TVKLYSHDGSENSYIKHGLVTHNEANQKLLAQNSFFGTALSFINGTLISSTLALSLWLSKNHAVEPSQFAMILPLVWHIA NTSTAITQQMSSIFENFGVVQEGMRSITAPFPPEDGSCSEELRVHEPTVVFQNVTFRYPRSSAAVVSLNFSINSHERVAI VGSSGAGKSTIIGLLLRLYEADQGTVSICGQDIRSVSVRSLRASIAVVSQETSILNRSVFDNISFGMPHTSASEVVEAAT MAGAHEFIRQLRDKDGRVGYAAHAGERGVKFSGGQRQRIAIARALLKNSPIIVLDEATSALDSESEFELKKRLEPLLRHK TVIAIAHRLGTIKDFDRIIVLEGGRIVEMGSHEQLLRSEGRYALLWNRQIEGISN
Sequences:
>Translated_615_residues MSSEVSSEGLFGRLINWLQQLVAITPAVENIVLPDRIGKFYCFFLIQAWRPLLWLLAIGTAVATADAIIPVAISHFVQLL GENSTSFPTSTVAVIVLFMLAHPLLTSAQRLIVNHSISANIATLVRWQSHSYIARQPISFFNSDLTGKLANRVLQTGPAL RDTIVTVVTSVWYIVIFIATTIFFLAQADVRLIVPTLIWVISYLLLLRVFLPRMNRHSRDMSSMRSLVSGRLVDSYSNIQ TVKLYSHDGSENSYIKHGLVTHNEANQKLLAQNSFFGTALSFINGTLISSTLALSLWLSKNHAVEPSQFAMILPLVWHIA NTSTAITQQMSSIFENFGVVQEGMRSITAPFPPEDGSCSEELRVHEPTVVFQNVTFRYPRSSAAVVSLNFSINSHERVAI VGSSGAGKSTIIGLLLRLYEADQGTVSICGQDIRSVSVRSLRASIAVVSQETSILNRSVFDNISFGMPHTSASEVVEAAT MAGAHEFIRQLRDKDGRVGYAAHAGERGVKFSGGQRQRIAIARALLKNSPIIVLDEATSALDSESEFELKKRLEPLLRHK TVIAIAHRLGTIKDFDRIIVLEGGRIVEMGSHEQLLRSEGRYALLWNRQIEGISN >Mature_614_residues SSEVSSEGLFGRLINWLQQLVAITPAVENIVLPDRIGKFYCFFLIQAWRPLLWLLAIGTAVATADAIIPVAISHFVQLLG ENSTSFPTSTVAVIVLFMLAHPLLTSAQRLIVNHSISANIATLVRWQSHSYIARQPISFFNSDLTGKLANRVLQTGPALR DTIVTVVTSVWYIVIFIATTIFFLAQADVRLIVPTLIWVISYLLLLRVFLPRMNRHSRDMSSMRSLVSGRLVDSYSNIQT VKLYSHDGSENSYIKHGLVTHNEANQKLLAQNSFFGTALSFINGTLISSTLALSLWLSKNHAVEPSQFAMILPLVWHIAN TSTAITQQMSSIFENFGVVQEGMRSITAPFPPEDGSCSEELRVHEPTVVFQNVTFRYPRSSAAVVSLNFSINSHERVAIV GSSGAGKSTIIGLLLRLYEADQGTVSICGQDIRSVSVRSLRASIAVVSQETSILNRSVFDNISFGMPHTSASEVVEAATM AGAHEFIRQLRDKDGRVGYAAHAGERGVKFSGGQRQRIAIARALLKNSPIIVLDEATSALDSESEFELKKRLEPLLRHKT VIAIAHRLGTIKDFDRIIVLEGGRIVEMGSHEQLLRSEGRYALLWNRQIEGISN
Specific function: Involved In Lipid A Export And Possibly Also In Glycerophospholipid Export And For Biogenesis Of The Outer Membrane. Transmembrane Domains (Tmd) Form A Pore In The Inner Membrane And The ATP-Binding Domain (Nbd) Is Responsible For Energy Generation. [C]
COG id: COG1132
COG function: function code V; ABC-type multidrug transport system, ATPase and permease components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI4505771, Length=267, Percent_Identity=44.9438202247191, Blast_Score=212, Evalue=7e-55, Organism=Homo sapiens, GI9961250, Length=267, Percent_Identity=44.9438202247191, Blast_Score=212, Evalue=7e-55, Organism=Homo sapiens, GI9961252, Length=267, Percent_Identity=44.9438202247191, Blast_Score=212, Evalue=7e-55, Organism=Homo sapiens, GI9955966, Length=489, Percent_Identity=30.0613496932515, Blast_Score=212, Evalue=9e-55, Organism=Homo sapiens, GI45243524, Length=489, Percent_Identity=30.0613496932515, Blast_Score=212, Evalue=9e-55, Organism=Homo sapiens, GI9955963, Length=483, Percent_Identity=30.4347826086957, Blast_Score=208, Evalue=2e-53, Organism=Homo sapiens, GI9955968, Length=482, Percent_Identity=29.6680497925311, Blast_Score=202, Evalue=6e-52, Organism=Homo sapiens, GI171184400, Length=527, Percent_Identity=32.0683111954459, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI42490749, Length=397, Percent_Identity=33.2493702770781, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI156105685, Length=520, Percent_Identity=29.2307692307692, Blast_Score=200, Evalue=4e-51, Organism=Homo sapiens, GI42741659, Length=255, Percent_Identity=42.7450980392157, Blast_Score=197, Evalue=3e-50, Organism=Homo sapiens, GI255708477, Length=365, Percent_Identity=35.0684931506849, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI21536378, Length=239, Percent_Identity=42.2594142259414, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI148612844, Length=248, Percent_Identity=41.5322580645161, Blast_Score=174, Evalue=3e-43, Organism=Homo sapiens, GI4557481, Length=492, Percent_Identity=26.8292682926829, Blast_Score=161, Evalue=2e-39, Organism=Homo sapiens, GI9665248, Length=242, Percent_Identity=36.7768595041322, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI89111135, Length=488, Percent_Identity=27.2540983606557, Blast_Score=139, Evalue=1e-32, Organism=Homo sapiens, GI134142345, Length=492, Percent_Identity=27.8455284552846, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI134142337, Length=492, Percent_Identity=27.8455284552846, Blast_Score=137, Evalue=4e-32, Organism=Homo sapiens, GI134142342, Length=492, Percent_Identity=27.8455284552846, Blast_Score=137, Evalue=4e-32, Organism=Homo sapiens, GI134142340, Length=492, Percent_Identity=27.8455284552846, Blast_Score=136, Evalue=5e-32, Organism=Homo sapiens, GI21729873, Length=481, Percent_Identity=26.1954261954262, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI15149474, Length=481, Percent_Identity=26.1954261954262, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI157502201, Length=478, Percent_Identity=26.3598326359833, Blast_Score=134, Evalue=3e-31, Organism=Homo sapiens, GI73747915, Length=539, Percent_Identity=23.3766233766234, Blast_Score=127, Evalue=4e-29, Organism=Homo sapiens, GI9955970, Length=234, Percent_Identity=32.4786324786325, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI66529005, Length=484, Percent_Identity=25.8264462809917, Blast_Score=124, Evalue=3e-28, Organism=Homo sapiens, GI190343023, Length=238, Percent_Identity=33.6134453781513, Blast_Score=118, Evalue=2e-26, Organism=Homo sapiens, GI134142335, Length=258, Percent_Identity=31.7829457364341, Blast_Score=117, Evalue=4e-26, Organism=Homo sapiens, GI73747917, Length=491, Percent_Identity=23.6252545824847, Blast_Score=112, Evalue=9e-25, Organism=Homo sapiens, GI110832837, Length=249, Percent_Identity=28.5140562248996, Blast_Score=106, Evalue=5e-23, Organism=Homo sapiens, GI25914749, Length=224, Percent_Identity=33.0357142857143, Blast_Score=105, Evalue=9e-23, Organism=Homo sapiens, GI255708373, Length=123, Percent_Identity=44.7154471544715, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI255708371, Length=123, Percent_Identity=44.7154471544715, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI21729876, Length=225, Percent_Identity=28, Blast_Score=102, Evalue=2e-21, Organism=Homo sapiens, GI110832839, Length=246, Percent_Identity=27.2357723577236, Blast_Score=100, Evalue=6e-21, Organism=Homo sapiens, GI110832835, Length=246, Percent_Identity=27.2357723577236, Blast_Score=100, Evalue=7e-21, Organism=Homo sapiens, GI157502203, Length=216, Percent_Identity=30.0925925925926, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI118582255, Length=236, Percent_Identity=30.5084745762712, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI90421313, Length=492, Percent_Identity=20.7317073170732, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI46592898, Length=214, Percent_Identity=32.7102803738318, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI46592978, Length=214, Percent_Identity=32.7102803738318, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI46592964, Length=214, Percent_Identity=32.7102803738318, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI46592971, Length=214, Percent_Identity=32.7102803738318, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI46592915, Length=214, Percent_Identity=32.7102803738318, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI46592956, Length=214, Percent_Identity=32.7102803738318, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI31657092, Length=237, Percent_Identity=27.8481012658228, Blast_Score=78, Evalue=3e-14, Organism=Homo sapiens, GI30795238, Length=217, Percent_Identity=26.7281105990783, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI27881501, Length=217, Percent_Identity=26.7281105990783, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI215820660, Length=203, Percent_Identity=27.5862068965517, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI20143975, Length=203, Percent_Identity=27.5862068965517, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI11967971, Length=224, Percent_Identity=26.7857142857143, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI150417984, Length=238, Percent_Identity=26.890756302521, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1787143, Length=512, Percent_Identity=32.6171875, Blast_Score=213, Evalue=4e-56, Organism=Escherichia coli, GI1786654, Length=574, Percent_Identity=25.9581881533101, Blast_Score=167, Evalue=2e-42, Organism=Escherichia coli, GI1786653, Length=589, Percent_Identity=24.1086587436333, Blast_Score=158, Evalue=8e-40, Organism=Escherichia coli, GI1787112, Length=313, Percent_Identity=30.0319488817891, Blast_Score=152, Evalue=6e-38, Organism=Escherichia coli, GI1787113, Length=261, Percent_Identity=30.6513409961686, Blast_Score=107, Evalue=3e-24, Organism=Escherichia coli, GI1789032, Length=227, Percent_Identity=35.2422907488987, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1788225, Length=221, Percent_Identity=33.9366515837104, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI1787105, Length=232, Percent_Identity=32.3275862068966, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1787029, Length=235, Percent_Identity=29.3617021276596, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1789672, Length=237, Percent_Identity=29.535864978903, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1788506, Length=258, Percent_Identity=33.7209302325581, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1787370, Length=221, Percent_Identity=29.4117647058824, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1787758, Length=216, Percent_Identity=34.7222222222222, Blast_Score=83, Evalue=6e-17, Organism=Escherichia coli, GI1786398, Length=235, Percent_Identity=28.0851063829787, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1788540, Length=418, Percent_Identity=22.7272727272727, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1788761, Length=216, Percent_Identity=28.2407407407407, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI145693107, Length=251, Percent_Identity=31.4741035856574, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1790162, Length=211, Percent_Identity=27.9620853080569, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1787500, Length=247, Percent_Identity=27.9352226720648, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1786253, Length=218, Percent_Identity=29.8165137614679, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI87081709, Length=240, Percent_Identity=25.8333333333333, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1790739, Length=233, Percent_Identity=27.0386266094421, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1786872, Length=193, Percent_Identity=32.6424870466321, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1790467, Length=236, Percent_Identity=30.5084745762712, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1786563, Length=190, Percent_Identity=28.4210526315789, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1787712, Length=242, Percent_Identity=27.6859504132231, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1788450, Length=220, Percent_Identity=25.4545454545455, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1787164, Length=228, Percent_Identity=26.7543859649123, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI48995001, Length=209, Percent_Identity=32.0574162679426, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1788472, Length=212, Percent_Identity=30.188679245283, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1787089, Length=227, Percent_Identity=27.3127753303965, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI1789962, Length=246, Percent_Identity=26.8292682926829, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1790544, Length=224, Percent_Identity=28.125, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1786345, Length=247, Percent_Identity=25.5060728744939, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI48994883, Length=238, Percent_Identity=28.1512605042017, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1789873, Length=179, Percent_Identity=27.3743016759777, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI87081834, Length=224, Percent_Identity=30.8035714285714, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI87081791, Length=233, Percent_Identity=26.6094420600858, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1786319, Length=233, Percent_Identity=27.4678111587983, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1789891, Length=223, Percent_Identity=28.6995515695067, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1787547, Length=243, Percent_Identity=27.1604938271605, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1786803, Length=238, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1787792, Length=212, Percent_Identity=27.3584905660377, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI48994943, Length=261, Percent_Identity=24.5210727969349, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI87082267, Length=231, Percent_Identity=24.6753246753247, Blast_Score=67, Evalue=5e-12, Organism=Escherichia coli, GI1789991, Length=224, Percent_Identity=26.3392857142857, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1789864, Length=229, Percent_Identity=24.0174672489083, Blast_Score=64, Evalue=4e-11, Organism=Escherichia coli, GI1789593, Length=239, Percent_Identity=28.0334728033473, Blast_Score=62, Evalue=8e-11, Organism=Escherichia coli, GI1788644, Length=200, Percent_Identity=29.5, Blast_Score=62, Evalue=9e-11, Organism=Caenorhabditis elegans, GI193202349, Length=565, Percent_Identity=29.9115044247788, Blast_Score=224, Evalue=9e-59, Organism=Caenorhabditis elegans, GI71992285, Length=243, Percent_Identity=44.8559670781893, Blast_Score=218, Evalue=1e-56, Organism=Caenorhabditis elegans, GI17565938, Length=490, Percent_Identity=29.7959183673469, Blast_Score=211, Evalue=7e-55, Organism=Caenorhabditis elegans, GI17541710, Length=593, Percent_Identity=29.3423271500843, Blast_Score=208, Evalue=6e-54, Organism=Caenorhabditis elegans, GI71996550, Length=418, Percent_Identity=33.2535885167464, Blast_Score=207, Evalue=9e-54, Organism=Caenorhabditis elegans, GI17543740, Length=498, Percent_Identity=29.3172690763052, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI212646699, Length=255, Percent_Identity=43.1372549019608, Blast_Score=205, Evalue=5e-53, Organism=Caenorhabditis elegans, GI115535101, Length=236, Percent_Identity=44.0677966101695, Blast_Score=204, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17567265, Length=243, Percent_Identity=43.2098765432099, Blast_Score=201, Evalue=7e-52, Organism=Caenorhabditis elegans, GI17567269, Length=236, Percent_Identity=43.6440677966102, Blast_Score=201, Evalue=1e-51, Organism=Caenorhabditis elegans, GI115533592, Length=503, Percent_Identity=30.8151093439364, Blast_Score=199, Evalue=5e-51, Organism=Caenorhabditis elegans, GI25146777, Length=258, Percent_Identity=40.6976744186046, Blast_Score=198, Evalue=7e-51, Organism=Caenorhabditis elegans, GI193211015, Length=245, Percent_Identity=42.8571428571429, Blast_Score=197, Evalue=2e-50, Organism=Caenorhabditis elegans, GI71996809, Length=245, Percent_Identity=42.8571428571429, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI193211017, Length=245, Percent_Identity=42.8571428571429, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17511077, Length=484, Percent_Identity=28.9256198347107, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17533971, Length=494, Percent_Identity=28.1376518218623, Blast_Score=194, Evalue=8e-50, Organism=Caenorhabditis elegans, GI17569145, Length=574, Percent_Identity=29.616724738676, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17558664, Length=510, Percent_Identity=29.2156862745098, Blast_Score=191, Evalue=7e-49, Organism=Caenorhabditis elegans, GI17569143, Length=508, Percent_Identity=30.9055118110236, Blast_Score=191, Evalue=8e-49, Organism=Caenorhabditis elegans, GI71992290, Length=503, Percent_Identity=29.0258449304175, Blast_Score=189, Evalue=4e-48, Organism=Caenorhabditis elegans, GI193209708, Length=242, Percent_Identity=39.2561983471074, Blast_Score=178, Evalue=7e-45, Organism=Caenorhabditis elegans, GI115534520, Length=573, Percent_Identity=26.7015706806283, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI71984940, Length=260, Percent_Identity=38.8461538461538, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI193208177, Length=256, Percent_Identity=37.890625, Blast_Score=162, Evalue=4e-40, Organism=Caenorhabditis elegans, GI17569081, Length=472, Percent_Identity=25.8474576271186, Blast_Score=150, Evalue=3e-36, Organism=Caenorhabditis elegans, GI25146765, Length=477, Percent_Identity=24.3186582809224, Blast_Score=142, Evalue=7e-34, Organism=Caenorhabditis elegans, GI71992070, Length=481, Percent_Identity=25.1559251559252, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17567243, Length=478, Percent_Identity=26.7782426778243, Blast_Score=138, Evalue=1e-32, Organism=Caenorhabditis elegans, GI86564969, Length=477, Percent_Identity=23.8993710691824, Blast_Score=138, Evalue=1e-32, Organism=Caenorhabditis elegans, GI71992066, Length=486, Percent_Identity=24.6913580246914, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17551702, Length=298, Percent_Identity=30.5369127516779, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17551700, Length=298, Percent_Identity=30.5369127516779, Blast_Score=130, Evalue=3e-30, Organism=Caenorhabditis elegans, GI71988343, Length=478, Percent_Identity=25.5230125523013, Blast_Score=128, Evalue=1e-29, Organism=Caenorhabditis elegans, GI71992080, Length=247, Percent_Identity=32.7935222672065, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17556528, Length=491, Percent_Identity=24.4399185336049, Blast_Score=116, Evalue=4e-26, Organism=Caenorhabditis elegans, GI32566680, Length=229, Percent_Identity=31.4410480349345, Blast_Score=115, Evalue=8e-26, Organism=Caenorhabditis elegans, GI193209740, Length=474, Percent_Identity=23.6286919831224, Blast_Score=111, Evalue=1e-24, Organism=Caenorhabditis elegans, GI32563727, Length=387, Percent_Identity=24.031007751938, Blast_Score=100, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17558094, Length=210, Percent_Identity=25.2380952380952, Blast_Score=80, Evalue=4e-15, Organism=Caenorhabditis elegans, GI115533608, Length=224, Percent_Identity=24.1071428571429, Blast_Score=69, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6323959, Length=244, Percent_Identity=40.5737704918033, Blast_Score=177, Evalue=6e-45, Organism=Saccharomyces cerevisiae, GI6324985, Length=492, Percent_Identity=28.0487804878049, Blast_Score=174, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6323217, Length=241, Percent_Identity=40.6639004149378, Blast_Score=158, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6320339, Length=486, Percent_Identity=26.5432098765432, Blast_Score=147, Evalue=5e-36, Organism=Saccharomyces cerevisiae, GI6322640, Length=242, Percent_Identity=38.4297520661157, Blast_Score=140, Evalue=7e-34, Organism=Saccharomyces cerevisiae, GI6321752, Length=505, Percent_Identity=24.950495049505, Blast_Score=139, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6321720, Length=496, Percent_Identity=25.8064516129032, Blast_Score=132, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6322980, Length=594, Percent_Identity=23.4006734006734, Blast_Score=132, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6323014, Length=484, Percent_Identity=24.1735537190083, Blast_Score=120, Evalue=6e-28, Organism=Saccharomyces cerevisiae, GI6322957, Length=239, Percent_Identity=30.1255230125523, Blast_Score=120, Evalue=7e-28, Organism=Saccharomyces cerevisiae, GI6322956, Length=163, Percent_Identity=26.9938650306748, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI24641565, Length=516, Percent_Identity=31.3953488372093, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI21357907, Length=485, Percent_Identity=33.8144329896907, Blast_Score=212, Evalue=7e-55, Organism=Drosophila melanogaster, GI17136662, Length=236, Percent_Identity=44.9152542372881, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI21357851, Length=408, Percent_Identity=34.3137254901961, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI45551502, Length=401, Percent_Identity=34.6633416458853, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI45551501, Length=401, Percent_Identity=34.6633416458853, Blast_Score=194, Evalue=2e-49, Organism=Drosophila melanogaster, GI24659289, Length=236, Percent_Identity=43.6440677966102, Blast_Score=191, Evalue=2e-48, Organism=Drosophila melanogaster, GI85726357, Length=248, Percent_Identity=42.3387096774194, Blast_Score=190, Evalue=3e-48, Organism=Drosophila melanogaster, GI24653245, Length=562, Percent_Identity=28.6476868327402, Blast_Score=186, Evalue=5e-47, Organism=Drosophila melanogaster, GI23397593, Length=483, Percent_Identity=31.2629399585921, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI281363262, Length=254, Percent_Identity=38.9763779527559, Blast_Score=182, Evalue=5e-46, Organism=Drosophila melanogaster, GI45550390, Length=482, Percent_Identity=27.8008298755187, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI62484234, Length=502, Percent_Identity=27.4900398406374, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI45552347, Length=477, Percent_Identity=27.4633123689727, Blast_Score=145, Evalue=1e-34, Organism=Drosophila melanogaster, GI45552337, Length=477, Percent_Identity=27.4633123689727, Blast_Score=145, Evalue=1e-34, Organism=Drosophila melanogaster, GI24648279, Length=497, Percent_Identity=27.364185110664, Blast_Score=142, Evalue=5e-34, Organism=Drosophila melanogaster, GI24585091, Length=479, Percent_Identity=26.5135699373695, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI281361582, Length=517, Percent_Identity=25.3384912959381, Blast_Score=140, Evalue=3e-33, Organism=Drosophila melanogaster, GI45552343, Length=478, Percent_Identity=26.9874476987448, Blast_Score=139, Evalue=9e-33, Organism=Drosophila melanogaster, GI45552363, Length=478, Percent_Identity=26.9874476987448, Blast_Score=138, Evalue=9e-33, Organism=Drosophila melanogaster, GI45552339, Length=479, Percent_Identity=26.9311064718163, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI45552341, Length=483, Percent_Identity=26.7080745341615, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI45552351, Length=479, Percent_Identity=26.9311064718163, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI45552361, Length=476, Percent_Identity=27.3109243697479, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI45552349, Length=476, Percent_Identity=27.3109243697479, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI45552359, Length=483, Percent_Identity=26.7080745341615, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI45550972, Length=483, Percent_Identity=26.7080745341615, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI24583969, Length=249, Percent_Identity=34.5381526104418, Blast_Score=137, Evalue=3e-32, Organism=Drosophila melanogaster, GI45552357, Length=249, Percent_Identity=34.5381526104418, Blast_Score=137, Evalue=3e-32, Organism=Drosophila melanogaster, GI45552355, Length=249, Percent_Identity=34.5381526104418, Blast_Score=137, Evalue=3e-32, Organism=Drosophila melanogaster, GI45552335, Length=249, Percent_Identity=34.5381526104418, Blast_Score=137, Evalue=3e-32, Organism=Drosophila melanogaster, GI45552353, Length=249, Percent_Identity=34.5381526104418, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI45552345, Length=249, Percent_Identity=34.5381526104418, Blast_Score=136, Evalue=4e-32, Organism=Drosophila melanogaster, GI45552437, Length=494, Percent_Identity=24.8987854251012, Blast_Score=133, Evalue=4e-31, Organism=Drosophila melanogaster, GI24585557, Length=494, Percent_Identity=24.8987854251012, Blast_Score=132, Evalue=7e-31, Organism=Drosophila melanogaster, GI24650986, Length=235, Percent_Identity=31.4893617021277, Blast_Score=130, Evalue=3e-30, Organism=Drosophila melanogaster, GI21358185, Length=235, Percent_Identity=31.4893617021277, Blast_Score=130, Evalue=3e-30, Organism=Drosophila melanogaster, GI221460257, Length=308, Percent_Identity=29.5454545454545, Blast_Score=130, Evalue=4e-30, Organism=Drosophila melanogaster, GI221474134, Length=235, Percent_Identity=34.468085106383, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI161077321, Length=304, Percent_Identity=29.6052631578947, Blast_Score=125, Evalue=7e-29, Organism=Drosophila melanogaster, GI19920928, Length=249, Percent_Identity=33.3333333333333, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI24649703, Length=237, Percent_Identity=34.1772151898734, Blast_Score=121, Evalue=2e-27, Organism=Drosophila melanogaster, GI28574259, Length=234, Percent_Identity=32.4786324786325, Blast_Score=119, Evalue=7e-27, Organism=Drosophila melanogaster, GI161078426, Length=216, Percent_Identity=29.1666666666667, Blast_Score=90, Evalue=5e-18, Organism=Drosophila melanogaster, GI116007328, Length=215, Percent_Identity=27.906976744186, Blast_Score=84, Evalue=4e-16, Organism=Drosophila melanogaster, GI28574150, Length=215, Percent_Identity=27.906976744186, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI28574744, Length=244, Percent_Identity=26.6393442622951, Blast_Score=76, Evalue=8e-14, Organism=Drosophila melanogaster, GI85816269, Length=237, Percent_Identity=28.6919831223629, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI24580553, Length=237, Percent_Identity=28.6919831223629, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI85724864, Length=237, Percent_Identity=28.6919831223629, Blast_Score=73, Evalue=6e-13, Organism=Drosophila melanogaster, GI24580555, Length=237, Percent_Identity=28.6919831223629, Blast_Score=73, Evalue=6e-13, Organism=Drosophila melanogaster, GI24648314, Length=234, Percent_Identity=28.2051282051282, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI161076684, Length=202, Percent_Identity=27.7227722772277, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI24581617, Length=202, Percent_Identity=27.7227722772277, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI24581615, Length=202, Percent_Identity=27.7227722772277, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI161076682, Length=202, Percent_Identity=27.7227722772277, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017940 - InterPro: IPR001140 - InterPro: IPR011527 - InterPro: IPR003593 [H]
Pfam domain/function: PF00664 ABC_membrane; PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 67877; Mature: 67746
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2 ; PS50929 ABC_TM1F
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSEVSSEGLFGRLINWLQQLVAITPAVENIVLPDRIGKFYCFFLIQAWRPLLWLLAIGT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AVATADAIIPVAISHFVQLLGENSTSFPTSTVAVIVLFMLAHPLLTSAQRLIVNHSISAN HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC IATLVRWQSHSYIARQPISFFNSDLTGKLANRVLQTGPALRDTIVTVVTSVWYIVIFIAT HHHHEEECCCCHHHHCCHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH TIFFLAQADVRLIVPTLIWVISYLLLLRVFLPRMNRHSRDMSSMRSLVSGRLVDSYSNIQ HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHCCCCEE TVKLYSHDGSENSYIKHGLVTHNEANQKLLAQNSFFGTALSFINGTLISSTLALSLWLSK EEEEEECCCCCCCCCCCCCEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECC NHAVEPSQFAMILPLVWHIANTSTAITQQMSSIFENFGVVQEGMRSITAPFPPEDGSCSE CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCC ELRVHEPTVVFQNVTFRYPRSSAAVVSLNFSINSHERVAIVGSSGAGKSTIIGLLLRLYE CCCCCCCEEEEECCEEECCCCCCEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHH ADQGTVSICGQDIRSVSVRSLRASIAVVSQETSILNRSVFDNISFGMPHTSASEVVEAAT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH MAGAHEFIRQLRDKDGRVGYAAHAGERGVKFSGGQRQRIAIARALLKNSPIIVLDEATSA HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHH LDSESEFELKKRLEPLLRHKTVIAIAHRLGTIKDFDRIIVLEGGRIVEMGSHEQLLRSEG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEECCCHHHHHHCCC RYALLWNRQIEGISN CEEEEECCCCCCCCC >Mature Secondary Structure SSEVSSEGLFGRLINWLQQLVAITPAVENIVLPDRIGKFYCFFLIQAWRPLLWLLAIGT CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AVATADAIIPVAISHFVQLLGENSTSFPTSTVAVIVLFMLAHPLLTSAQRLIVNHSISAN HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC IATLVRWQSHSYIARQPISFFNSDLTGKLANRVLQTGPALRDTIVTVVTSVWYIVIFIAT HHHHEEECCCCHHHHCCHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH TIFFLAQADVRLIVPTLIWVISYLLLLRVFLPRMNRHSRDMSSMRSLVSGRLVDSYSNIQ HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHCCCCEE TVKLYSHDGSENSYIKHGLVTHNEANQKLLAQNSFFGTALSFINGTLISSTLALSLWLSK EEEEEECCCCCCCCCCCCCEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECC NHAVEPSQFAMILPLVWHIANTSTAITQQMSSIFENFGVVQEGMRSITAPFPPEDGSCSE CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCC ELRVHEPTVVFQNVTFRYPRSSAAVVSLNFSINSHERVAIVGSSGAGKSTIIGLLLRLYE CCCCCCCEEEEECCEEECCCCCCEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHH ADQGTVSICGQDIRSVSVRSLRASIAVVSQETSILNRSVFDNISFGMPHTSASEVVEAAT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH MAGAHEFIRQLRDKDGRVGYAAHAGERGVKFSGGQRQRIAIARALLKNSPIIVLDEATSA HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHH LDSESEFELKKRLEPLLRHKTVIAIAHRLGTIKDFDRIIVLEGGRIVEMGSHEQLLRSEG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEECCCHHHHHHCCC RYALLWNRQIEGISN CEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]