Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is yccV [C]
Identifier: 159185436
GI number: 159185436
Start: 1756761
End: 1757090
Strand: Direct
Name: yccV [C]
Synonym: Atu8165
Alternate gene names: 159185436
Gene position: 1756761-1757090 (Clockwise)
Preceding gene: 15889074
Following gene: 159184911
Centisome position: 61.82
GC content: 56.36
Gene sequence:
>330_bases ATGAAACAAAGAGACGCAAAATTCACGCTTGGCGAGATCGTCCGCCACAAGGTGTTTCCGTTCCGCGGCGTGGTCATCGA CGTGGACCCGGAATATGCCAATACCGAGGAATGGTGGAACGCCATCCCCGCGGAAATCAGGCCGGAGCGCGACCAGCCCT TTTATCATCTGCTGGCCGAAAACGAGGAGACGGAATATGTCGCCTATGTTTCCGAACAGAACCTCGTGCACGACGAAAAC GATACGCCGCTGAGAAACCCCAATATCGGCCGCATCTTCGACAAGGCGCCGAACGGCGAATGGCGTCCGAAGATATCGAC GGCGCATTGA
Upstream 100 bases:
>100_bases CAGAAAGCGCTGAGCTTTGCGGCAGACCGGCACTGGGACCGCTAGGTCTTGATATTTCGCATTCCGACACCAACTAGTAT TGGGAAAGGAAATTCATGCC
Downstream 100 bases:
>100_bases CGCCTGCCAACCATCTCCCCCCTCCCAGGGACATAAAGCGCGCATAAAAAAACCGGTCTGTTGCCAGACCGGTTTTGTCA TTCTTGATGCTTTGTAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MKQRDAKFTLGEIVRHKVFPFRGVVIDVDPEYANTEEWWNAIPAEIRPERDQPFYHLLAENEETEYVAYVSEQNLVHDEN DTPLRNPNIGRIFDKAPNGEWRPKISTAH
Sequences:
>Translated_109_residues MKQRDAKFTLGEIVRHKVFPFRGVVIDVDPEYANTEEWWNAIPAEIRPERDQPFYHLLAENEETEYVAYVSEQNLVHDEN DTPLRNPNIGRIFDKAPNGEWRPKISTAH >Mature_109_residues MKQRDAKFTLGEIVRHKVFPFRGVVIDVDPEYANTEEWWNAIPAEIRPERDQPFYHLLAENEETEYVAYVSEQNLVHDEN DTPLRNPNIGRIFDKAPNGEWRPKISTAH
Specific function: Unknown
COG id: COG3785
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12818; Mature: 12818
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQRDAKFTLGEIVRHKVFPFRGVVIDVDPEYANTEEWWNAIPAEIRPERDQPFYHLLAE CCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEC NEETEYVAYVSEQNLVHDENDTPLRNPNIGRIFDKAPNGEWRPKISTAH CCCCEEEEEECCCCCEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MKQRDAKFTLGEIVRHKVFPFRGVVIDVDPEYANTEEWWNAIPAEIRPERDQPFYHLLAE CCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEC NEETEYVAYVSEQNLVHDENDTPLRNPNIGRIFDKAPNGEWRPKISTAH CCCCEEEEEECCCCCEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA