Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889074
Identifier: 15889074
GI number: 15889074
Start: 1755753
End: 1756673
Strand: Direct
Name: 15889074
Synonym: Atu1771
Alternate gene names: NA
Gene position: 1755753-1756673 (Clockwise)
Preceding gene: 15889073
Following gene: 159185436
Centisome position: 61.79
GC content: 60.91
Gene sequence:
>921_bases ATGTCGAACAAGCCAGCCTCTCAGCAAACACGCCTTACGGACTGGCTCATCTTTCTGGCGGTGCCGTTCTTTTTCTCCAG CAATGTCATTTTTGGCCGCGGCGTCGTTGGCGAAGTCTCGCCTTTTATCGCCGCCTTTATCCGCTGGATGGGATCGACGC TCATCATCGCCCCCTTCATGATTGCCGACTGGCGGAACTGCCTCGCCTTCGTGCGCGACAAAATGCTGCTCTGGCTGGTG CTCGGCATTCTCGGCATGGGCATCTGCGGCGGCGTGGTCTATTGGGGCCTCACCATGACGACGGCCGCCAACGGCACGCT GATCTACACCACCTCGTCGCTGTTCATCATCCTGTTCCAGCGCATCTTTCAGGGGCGGCCGATCCGAAAGCTTGAAGTGG CCGGCATGGTCATCGCCTTTGCCGGTGTCGCGGCCATCGTTCTCAAGGGAGATATCTCCGCTCTCCGGCATATGAATTTC AACATCGGCGATTTCGCGATTTTGACGGCGGCGATCGCCTTTGCCATCTATTCGCTGTTGCTGCGCGATCCCGCGGCGCG GCAGATGGCATCCTTCAGCCTTTTCGGCCTGATCGCATTTTCCGGCGCGCTGGTGCTTCTGCCGCCGGCCGCACTGGAAC TGGCGCAGGGCGGCATGCTGCCTGCCACCGGCGCGGCCTGGGCGAAGATCGGCGGCATCATCCTCTTCGCCTCGCTTCTG GCGTTTTATTGCTTCACCCATACGGTGCGCGTTTTCGGCCCGGCCACGGCCGGCATCACGCTTTACATGATGCCGCCGGT CTCGATCCTCATGGCGACGATATTCTTGGGAGAGACCTTCGAGACCTATCACGCCATCGGCATCGTGTTGGTCACCGGCG GCGTCATCCTCGCCACCGCGCCGATTGGCAGAAAGCGCTGA
Upstream 100 bases:
>100_bases GATCTAACTTCGGAGCGCTCCCTTGGGGCGCTCCTTCCATGCCGGCGGTTTTCCCTGGAAAGCCGCCGTTTTCTTTTGAA GCCCAGCCATATCGTGAAGA
Downstream 100 bases:
>100_bases GCTTTGCGGCAGACCGGCACTGGGACCGCTAGGTCTTGATATTTCGCATTCCGACACCAACTAGTATTGGGAAAGGAAAT TCATGCCATGAAACAAAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSNKPASQQTRLTDWLIFLAVPFFFSSNVIFGRGVVGEVSPFIAAFIRWMGSTLIIAPFMIADWRNCLAFVRDKMLLWLV LGILGMGICGGVVYWGLTMTTAANGTLIYTTSSLFIILFQRIFQGRPIRKLEVAGMVIAFAGVAAIVLKGDISALRHMNF NIGDFAILTAAIAFAIYSLLLRDPAARQMASFSLFGLIAFSGALVLLPPAALELAQGGMLPATGAAWAKIGGIILFASLL AFYCFTHTVRVFGPATAGITLYMMPPVSILMATIFLGETFETYHAIGIVLVTGGVILATAPIGRKR
Sequences:
>Translated_306_residues MSNKPASQQTRLTDWLIFLAVPFFFSSNVIFGRGVVGEVSPFIAAFIRWMGSTLIIAPFMIADWRNCLAFVRDKMLLWLV LGILGMGICGGVVYWGLTMTTAANGTLIYTTSSLFIILFQRIFQGRPIRKLEVAGMVIAFAGVAAIVLKGDISALRHMNF NIGDFAILTAAIAFAIYSLLLRDPAARQMASFSLFGLIAFSGALVLLPPAALELAQGGMLPATGAAWAKIGGIILFASLL AFYCFTHTVRVFGPATAGITLYMMPPVSILMATIFLGETFETYHAIGIVLVTGGVILATAPIGRKR >Mature_305_residues SNKPASQQTRLTDWLIFLAVPFFFSSNVIFGRGVVGEVSPFIAAFIRWMGSTLIIAPFMIADWRNCLAFVRDKMLLWLVL GILGMGICGGVVYWGLTMTTAANGTLIYTTSSLFIILFQRIFQGRPIRKLEVAGMVIAFAGVAAIVLKGDISALRHMNFN IGDFAILTAAIAFAIYSLLLRDPAARQMASFSLFGLIAFSGALVLLPPAALELAQGGMLPATGAAWAKIGGIILFASLLA FYCFTHTVRVFGPATAGITLYMMPPVSILMATIFLGETFETYHAIGIVLVTGGVILATAPIGRKR
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32902; Mature: 32771
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKPASQQTRLTDWLIFLAVPFFFSSNVIFGRGVVGEVSPFIAAFIRWMGSTLIIAPFM CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHH IADWRNCLAFVRDKMLLWLVLGILGMGICGGVVYWGLTMTTAANGTLIYTTSSLFIILFQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEHHHHHHHHHH RIFQGRPIRKLEVAGMVIAFAGVAAIVLKGDISALRHMNFNIGDFAILTAAIAFAIYSLL HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LRDPAARQMASFSLFGLIAFSGALVLLPPAALELAQGGMLPATGAAWAKIGGIILFASLL HCCHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH AFYCFTHTVRVFGPATAGITLYMMPPVSILMATIFLGETFETYHAIGIVLVTGGVILATA HHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHEEECCEEEEEC PIGRKR CCCCCC >Mature Secondary Structure SNKPASQQTRLTDWLIFLAVPFFFSSNVIFGRGVVGEVSPFIAAFIRWMGSTLIIAPFM CCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHH IADWRNCLAFVRDKMLLWLVLGILGMGICGGVVYWGLTMTTAANGTLIYTTSSLFIILFQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEHHHHHHHHHH RIFQGRPIRKLEVAGMVIAFAGVAAIVLKGDISALRHMNFNIGDFAILTAAIAFAIYSLL HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LRDPAARQMASFSLFGLIAFSGALVLLPPAALELAQGGMLPATGAAWAKIGGIILFASLL HCCHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH AFYCFTHTVRVFGPATAGITLYMMPPVSILMATIFLGETFETYHAIGIVLVTGGVILATA HHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHEEECCEEEEEC PIGRKR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA