Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is yejA [C]

Identifier: 159184911

GI number: 159184911

Start: 1758155

End: 1760002

Strand: Direct

Name: yejA [C]

Synonym: Atu1774

Alternate gene names: 159184911

Gene position: 1758155-1760002 (Clockwise)

Preceding gene: 159185436

Following gene: 159184912

Centisome position: 61.87

GC content: 59.36

Gene sequence:

>1848_bases
ATGCGCAACCTTGCGGCCCTCCTCCCCGCATTGTTCCTTTTGGGATCATCCCTGCTTCCCGCCGGGACGGCCCTGGCGCA
ACCGCTGCACGGCATATCCATGCATGGCACGCCGGAGCTTCCCGCAGACTTCCGCCACTTCCCTTATGTCAATCCCGACG
TGAAGAAGGGCGGCCGCATCTCCTATGGCGTCGTTGGCACCTTCGACAGCCTCAATCCCTTCGTGCTCAAGGGAATGCGC
ACCACCGCACGCGGCGTCTGGGATCCGGAATTCGGCAATCTCCTCTACGAATCGCTGATGCTGCGCTCCAGTGACGAGCC
TTTCAGCCTTTATGGCCTCTTGGCCGAAACCGTGGAATGGGACGACGAGCGCAGCTTCATCCAGTTCAACATCAACCCCA
GGGCAAAATGGTCTGACGGCAAGCCAGTGACGCCTGATGATGTGATCTTCACCTTCAGCCTCTTGAAGGAAAAAGGCCGC
CCGCCCTTCAACAGCCGTCTGGACGGCGTGGCAAAAATGGAAAAGGTCGGTGATCGCGGCGTGCGCTTCACCTTTAATGA
CAAGGCGAACCGCGAAACGCCGCTCATTCTCGCCTCCTCCACACCGATCCTGCCGAAACATGCGATCGACCCGGAAAAAT
TCGAGCAGGCAGGCCTTGGGCCAGTCGTCGGCTCGGGTCCATACCGAATCAAGACCCTGCGGCCGGGCGAGCGAATCATC
TGGGAACGCAATCCGGATTATTGGGGCAAGGACATCCCCGGCAAGGTCGGCTTCGACAATTACGACGAGATCAGCGTGAC
CTATTTCCTTCAGGTCACCACCATGTTCGAAGCCTTCAAGAAGGGCGATATCGACATCTATCCCGAAGGTGACGCCATCA
ACGGCACCTCCGATACCTCGCATTGGGGACAGGCCTATAATTTCCCGGCCGTCCATCGCGGCGATATCGTCAAGGACGTC
TTCCAGCCGCGCCTGCCGACCGGCATGTTCGGCCTCGTCTTCAACACACGCCGGGCCACCTTTGCCGATGAAAAAGTGCG
TGAAGGCCTGTCCTATGCGCTCGATTTCGAATGGCTGAACAGGAACATCCTCGGTGGCTCCTTCAAGCGCACCCAGAGCT
ATTGGCAGAATTCCCCGCTCGGAGCCTATGGCAATGCCGCAGATGAGCGCGAGCTTGCGCTGCTGGGCGACGCTGCGAAA
ACCATGCCTGCGGAACTACTGGCGGGCACCTATGCCATGCCGACCACCGATGGCACGGGTGCTGACCGCAAGGTATTGAA
ACTGGCCGTCGACAAGCTGAAAGAGGCCGGATACAGCATCAAGAATGGCAAAATGTCCGACGCCAATGGCCGTCAGCTCG
CCTTCGAGATCATGACCCAGAACCCGGCGCAGGAGCGCATCGCGCTTGCCTATCAGCGCTCGCTCAACCTGATTGGCGTC
GCCATGGGCATCCGCTCGGTGGATGACGGGCAATATCAGGCCCGTTCGAACAGCTTCGATTACGACATGATCATCCGCTC
CCTGCCCTCCTCGCTTTCGCCGGGCATGGAGCAGCTGAACCGCTGGAACTCGCTCTCCCGCGATGCGCAGGGCAGCTTCA
ACTATGCGGGCGTTGCCAATCCCGATATCGACCGGATGATAGAGGCGCTGCTGCAGGCGCGCTCGACGGAAGATTTCCAG
GCGGCGGTGCGCGCCTATGACCGTCTGCTCGTGGCCGGCCACTACATTATTCCGCTCTATTACATCGGCGCGCAATGGGT
TGCGCGCTGGAAATATATCGACCGTCCGGATATGACCCCGATATCAGGAAATCAGAAACAGACCTGGTGGGATGCAAGGG
TGCAATAA

Upstream 100 bases:

>100_bases
GCATGGGTCATGCGATATCCGTATGCTACATATCTGCCAGAATCATGACGATAAACCGGTTGTGACGCAAACCGGACGGA
CAGTTAGACAGGATAGTGAC

Downstream 100 bases:

>100_bases
CCCGCCGCCGCCCGGTCCAGACAAGGGAAGATGAAACCATGGAACGCATCGTTGTCGACGTCGTATCGGATATGGTCTGC
CCCTGGTGTTATCTCGGCAA

Product: ABC transporter, substrate binding protein (peptide)

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 615; Mature: 615

Protein sequence:

>615_residues
MRNLAALLPALFLLGSSLLPAGTALAQPLHGISMHGTPELPADFRHFPYVNPDVKKGGRISYGVVGTFDSLNPFVLKGMR
TTARGVWDPEFGNLLYESLMLRSSDEPFSLYGLLAETVEWDDERSFIQFNINPRAKWSDGKPVTPDDVIFTFSLLKEKGR
PPFNSRLDGVAKMEKVGDRGVRFTFNDKANRETPLILASSTPILPKHAIDPEKFEQAGLGPVVGSGPYRIKTLRPGERII
WERNPDYWGKDIPGKVGFDNYDEISVTYFLQVTTMFEAFKKGDIDIYPEGDAINGTSDTSHWGQAYNFPAVHRGDIVKDV
FQPRLPTGMFGLVFNTRRATFADEKVREGLSYALDFEWLNRNILGGSFKRTQSYWQNSPLGAYGNAADERELALLGDAAK
TMPAELLAGTYAMPTTDGTGADRKVLKLAVDKLKEAGYSIKNGKMSDANGRQLAFEIMTQNPAQERIALAYQRSLNLIGV
AMGIRSVDDGQYQARSNSFDYDMIIRSLPSSLSPGMEQLNRWNSLSRDAQGSFNYAGVANPDIDRMIEALLQARSTEDFQ
AAVRAYDRLLVAGHYIIPLYYIGAQWVARWKYIDRPDMTPISGNQKQTWWDARVQ

Sequences:

>Translated_615_residues
MRNLAALLPALFLLGSSLLPAGTALAQPLHGISMHGTPELPADFRHFPYVNPDVKKGGRISYGVVGTFDSLNPFVLKGMR
TTARGVWDPEFGNLLYESLMLRSSDEPFSLYGLLAETVEWDDERSFIQFNINPRAKWSDGKPVTPDDVIFTFSLLKEKGR
PPFNSRLDGVAKMEKVGDRGVRFTFNDKANRETPLILASSTPILPKHAIDPEKFEQAGLGPVVGSGPYRIKTLRPGERII
WERNPDYWGKDIPGKVGFDNYDEISVTYFLQVTTMFEAFKKGDIDIYPEGDAINGTSDTSHWGQAYNFPAVHRGDIVKDV
FQPRLPTGMFGLVFNTRRATFADEKVREGLSYALDFEWLNRNILGGSFKRTQSYWQNSPLGAYGNAADERELALLGDAAK
TMPAELLAGTYAMPTTDGTGADRKVLKLAVDKLKEAGYSIKNGKMSDANGRQLAFEIMTQNPAQERIALAYQRSLNLIGV
AMGIRSVDDGQYQARSNSFDYDMIIRSLPSSLSPGMEQLNRWNSLSRDAQGSFNYAGVANPDIDRMIEALLQARSTEDFQ
AAVRAYDRLLVAGHYIIPLYYIGAQWVARWKYIDRPDMTPISGNQKQTWWDARVQ
>Mature_615_residues
MRNLAALLPALFLLGSSLLPAGTALAQPLHGISMHGTPELPADFRHFPYVNPDVKKGGRISYGVVGTFDSLNPFVLKGMR
TTARGVWDPEFGNLLYESLMLRSSDEPFSLYGLLAETVEWDDERSFIQFNINPRAKWSDGKPVTPDDVIFTFSLLKEKGR
PPFNSRLDGVAKMEKVGDRGVRFTFNDKANRETPLILASSTPILPKHAIDPEKFEQAGLGPVVGSGPYRIKTLRPGERII
WERNPDYWGKDIPGKVGFDNYDEISVTYFLQVTTMFEAFKKGDIDIYPEGDAINGTSDTSHWGQAYNFPAVHRGDIVKDV
FQPRLPTGMFGLVFNTRRATFADEKVREGLSYALDFEWLNRNILGGSFKRTQSYWQNSPLGAYGNAADERELALLGDAAK
TMPAELLAGTYAMPTTDGTGADRKVLKLAVDKLKEAGYSIKNGKMSDANGRQLAFEIMTQNPAQERIALAYQRSLNLIGV
AMGIRSVDDGQYQARSNSFDYDMIIRSLPSSLSPGMEQLNRWNSLSRDAQGSFNYAGVANPDIDRMIEALLQARSTEDFQ
AAVRAYDRLLVAGHYIIPLYYIGAQWVARWKYIDRPDMTPISGNQKQTWWDARVQ

Specific function: Unknown

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87082063, Length=583, Percent_Identity=33.2761578044597, Blast_Score=308, Evalue=1e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 68741; Mature: 68741

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLAALLPALFLLGSSLLPAGTALAQPLHGISMHGTPELPADFRHFPYVNPDVKKGGRI
CCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
SYGVVGTFDSLNPFVLKGMRTTARGVWDPEFGNLLYESLMLRSSDEPFSLYGLLAETVEW
EEEEEECCCCCCHHHHHCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
DDERSFIQFNINPRAKWSDGKPVTPDDVIFTFSLLKEKGRPPFNSRLDGVAKMEKVGDRG
CCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
VRFTFNDKANRETPLILASSTPILPKHAIDPEKFEQAGLGPVVGSGPYRIKTLRPGERII
EEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCEEE
WERNPDYWGKDIPGKVGFDNYDEISVTYFLQVTTMFEAFKKGDIDIYPEGDAINGTSDTS
EECCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHCCCEEEECCCCCCCCCCCCC
HWGQAYNFPAVHRGDIVKDVFQPRLPTGMFGLVFNTRRATFADEKVREGLSYALDFEWLN
CCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHCCHHHEEEHHHHC
RNILGGSFKRTQSYWQNSPLGAYGNAADERELALLGDAAKTMPAELLAGTYAMPTTDGTG
CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCC
ADRKVLKLAVDKLKEAGYSIKNGKMSDANGRQLAFEIMTQNPAQERIALAYQRSLNLIGV
CHHHHHHHHHHHHHHCCCEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEE
AMGIRSVDDGQYQARSNSFDYDMIIRSLPSSLSPGMEQLNRWNSLSRDAQGSFNYAGVAN
ECCCCCCCCCCHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDIDRMIEALLQARSTEDFQAAVRAYDRLLVAGHYIIPLYYIGAQWVARWKYIDRPDMTP
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCC
ISGNQKQTWWDARVQ
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MRNLAALLPALFLLGSSLLPAGTALAQPLHGISMHGTPELPADFRHFPYVNPDVKKGGRI
CCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
SYGVVGTFDSLNPFVLKGMRTTARGVWDPEFGNLLYESLMLRSSDEPFSLYGLLAETVEW
EEEEEECCCCCCHHHHHCCHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
DDERSFIQFNINPRAKWSDGKPVTPDDVIFTFSLLKEKGRPPFNSRLDGVAKMEKVGDRG
CCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
VRFTFNDKANRETPLILASSTPILPKHAIDPEKFEQAGLGPVVGSGPYRIKTLRPGERII
EEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCEEE
WERNPDYWGKDIPGKVGFDNYDEISVTYFLQVTTMFEAFKKGDIDIYPEGDAINGTSDTS
EECCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHCCCEEEECCCCCCCCCCCCC
HWGQAYNFPAVHRGDIVKDVFQPRLPTGMFGLVFNTRRATFADEKVREGLSYALDFEWLN
CCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHCCHHHEEEHHHHC
RNILGGSFKRTQSYWQNSPLGAYGNAADERELALLGDAAKTMPAELLAGTYAMPTTDGTG
CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCC
ADRKVLKLAVDKLKEAGYSIKNGKMSDANGRQLAFEIMTQNPAQERIALAYQRSLNLIGV
CHHHHHHHHHHHHHHCCCEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEE
AMGIRSVDDGQYQARSNSFDYDMIIRSLPSSLSPGMEQLNRWNSLSRDAQGSFNYAGVAN
ECCCCCCCCCCHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDIDRMIEALLQARSTEDFQAAVRAYDRLLVAGHYIIPLYYIGAQWVARWKYIDRPDMTP
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCC
ISGNQKQTWWDARVQ
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA