Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is fabG [H]
Identifier: 159185317
GI number: 159185317
Start: 2652774
End: 2653628
Strand: Direct
Name: fabG [H]
Synonym: Atu2668
Alternate gene names: 159185317
Gene position: 2652774-2653628 (Clockwise)
Preceding gene: 159185315
Following gene: 159185318
Centisome position: 93.36
GC content: 59.3
Gene sequence:
>855_bases ATGACGACCATCCACCCCGCATTCAAGGAAGATAATGTCGCTGTCATAACAGGTGCGGCGTCCGGTATCGGACTAGCCGC CGCCCGTAAATTCGCCAGTTTCGGCATGAGCGTCGTGCTCGTCGATCTCGACGGCGAAAAACTCGCCGCAGCACATGCGG ATATTCTAAACGTCGCCAAGGATGGCGAAGCGCAGATCGTCGCCATCCCGACCGACGTCTCGAAACTCGATGAGCTGGAG GCTTTGGAACGTGCCGTGATCCAGCGTTTCGGCCGCGTCCACGTTCTCATGAACAATGCCGGCATCCAGCCGGGCAGCGC CATCTTCGGACCTCAGGCCAACTGGGAGAAGATTATCGGCGTCAATCTGATGGGCGTCGTGAACGGCAGCCGGGTGTTCG GCCAGGGCATGATCACCCATGGCGAACCGTCGCTGATCATCAATACCGGCTCGAAACAGGGCATCACCACGCCTCCGGGC GATCCTGCCTATAACGTCTCGAAGTCCGGTGTGAAAACCTTCACGGAAGCGCTTCAGCACGAATTGCGCAATATTCCAAA CAGCGCGGTTTCTGCCCATCTGCTGATACCCGGTTTCGTCTTCACCGGCCTGACCGCCCATGGCAGGACCGAAAAGCCGC AGGGTGCCTGGACCGGCGAGCAAACCGTCGATTTCATGATCGAGAGTATCGGCCGCGGCGATTTCTACATTCTCTGCCCG GATGGCGAGGTGGACCGCCCGACGGATGAGAAGCGCATTCTCTGGGCAGCCCAGGACATCGTCCAGAACCGCCCGCCGCT CTCACGCTGGCATACGGAATATTCCGCCGCCTTCACCAGCTTCCTGAAAAACTGA
Upstream 100 bases:
>100_bases AAGCGGCGCGATCGACTTGAAGACCGTGAATGAAGCCACTCAGGTTCAGGCAACGTTGCAAACCGCTGGAAACAGCAGAA ACGACGCGAAGGAGAAACCT
Downstream 100 bases:
>100_bases AGCTCCAGCCGCCGTGCCTGAAAGGGTGCGGCGGCTATTTCCCCCTCGCAGGCGCGTCATCGCTCAAAAACATTGGCAGA AACACGAAACCGCGTTAAGC
Product: oxidoreductase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTTIHPAFKEDNVAVITGAASGIGLAAARKFASFGMSVVLVDLDGEKLAAAHADILNVAKDGEAQIVAIPTDVSKLDELE ALERAVIQRFGRVHVLMNNAGIQPGSAIFGPQANWEKIIGVNLMGVVNGSRVFGQGMITHGEPSLIINTGSKQGITTPPG DPAYNVSKSGVKTFTEALQHELRNIPNSAVSAHLLIPGFVFTGLTAHGRTEKPQGAWTGEQTVDFMIESIGRGDFYILCP DGEVDRPTDEKRILWAAQDIVQNRPPLSRWHTEYSAAFTSFLKN
Sequences:
>Translated_284_residues MTTIHPAFKEDNVAVITGAASGIGLAAARKFASFGMSVVLVDLDGEKLAAAHADILNVAKDGEAQIVAIPTDVSKLDELE ALERAVIQRFGRVHVLMNNAGIQPGSAIFGPQANWEKIIGVNLMGVVNGSRVFGQGMITHGEPSLIINTGSKQGITTPPG DPAYNVSKSGVKTFTEALQHELRNIPNSAVSAHLLIPGFVFTGLTAHGRTEKPQGAWTGEQTVDFMIESIGRGDFYILCP DGEVDRPTDEKRILWAAQDIVQNRPPLSRWHTEYSAAFTSFLKN >Mature_283_residues TTIHPAFKEDNVAVITGAASGIGLAAARKFASFGMSVVLVDLDGEKLAAAHADILNVAKDGEAQIVAIPTDVSKLDELEA LERAVIQRFGRVHVLMNNAGIQPGSAIFGPQANWEKIIGVNLMGVVNGSRVFGQGMITHGEPSLIINTGSKQGITTPPGD PAYNVSKSGVKTFTEALQHELRNIPNSAVSAHLLIPGFVFTGLTAHGRTEKPQGAWTGEQTVDFMIESIGRGDFYILCPD GEVDRPTDEKRILWAAQDIVQNRPPLSRWHTEYSAAFTSFLKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI31542939, Length=210, Percent_Identity=32.3809523809524, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI7706318, Length=189, Percent_Identity=30.1587301587302, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI224922801, Length=170, Percent_Identity=33.5294117647059, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI83715985, Length=186, Percent_Identity=31.7204301075269, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI4758504, Length=186, Percent_Identity=31.7204301075269, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI109715829, Length=251, Percent_Identity=25.0996015936255, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI20149619, Length=212, Percent_Identity=26.8867924528302, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI19923817, Length=207, Percent_Identity=25.1207729468599, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI25282469, Length=225, Percent_Identity=27.1111111111111, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1789208, Length=215, Percent_Identity=26.9767441860465, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1789057, Length=189, Percent_Identity=29.6296296296296, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI87082100, Length=212, Percent_Identity=26.4150943396226, Blast_Score=64, Evalue=9e-12, Organism=Escherichia coli, GI1790717, Length=213, Percent_Identity=27.6995305164319, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787335, Length=200, Percent_Identity=30, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788459, Length=175, Percent_Identity=30.8571428571429, Blast_Score=61, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17555706, Length=198, Percent_Identity=31.8181818181818, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI25147288, Length=197, Percent_Identity=32.994923857868, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17562908, Length=252, Percent_Identity=30.952380952381, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17561402, Length=212, Percent_Identity=26.4150943396226, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71994600, Length=207, Percent_Identity=28.0193236714976, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17560332, Length=221, Percent_Identity=26.6968325791855, Blast_Score=64, Evalue=9e-11, Organism=Drosophila melanogaster, GI24644339, Length=198, Percent_Identity=31.8181818181818, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI116007234, Length=206, Percent_Identity=30.5825242718447, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI116007232, Length=181, Percent_Identity=32.5966850828729, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI28571526, Length=204, Percent_Identity=31.8627450980392, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24584752, Length=209, Percent_Identity=31.1004784688995, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI21357041, Length=205, Percent_Identity=29.7560975609756, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI21358495, Length=202, Percent_Identity=27.7227722772277, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI281364892, Length=209, Percent_Identity=29.6650717703349, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI17737361, Length=186, Percent_Identity=28.494623655914, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24639444, Length=198, Percent_Identity=27.7777777777778, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI23397609, Length=197, Percent_Identity=30.9644670050761, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24649181, Length=234, Percent_Identity=25.6410256410256, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 30469; Mature: 30338
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIHPAFKEDNVAVITGAASGIGLAAARKFASFGMSVVLVDLDGEKLAAAHADILNVAK CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCC DGEAQIVAIPTDVSKLDELEALERAVIQRFGRVHVLMNNAGIQPGSAIFGPQANWEKIIG CCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCCCCEEC VNLMGVVNGSRVFGQGMITHGEPSLIINTGSKQGITTPPGDPAYNVSKSGVKTFTEALQH EEEEEEECCCEEECCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ELRNIPNSAVSAHLLIPGFVFTGLTAHGRTEKPQGAWTGEQTVDFMIESIGRGDFYILCP HHHHCCCCHHEEEEEEHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECC DGEVDRPTDEKRILWAAQDIVQNRPPLSRWHTEYSAAFTSFLKN CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTIHPAFKEDNVAVITGAASGIGLAAARKFASFGMSVVLVDLDGEKLAAAHADILNVAK CCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCC DGEAQIVAIPTDVSKLDELEALERAVIQRFGRVHVLMNNAGIQPGSAIFGPQANWEKIIG CCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCCCCEEC VNLMGVVNGSRVFGQGMITHGEPSLIINTGSKQGITTPPGDPAYNVSKSGVKTFTEALQH EEEEEEECCCEEECCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ELRNIPNSAVSAHLLIPGFVFTGLTAHGRTEKPQGAWTGEQTVDFMIESIGRGDFYILCP HHHHCCCCHHEEEEEEHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECC DGEVDRPTDEKRILWAAQDIVQNRPPLSRWHTEYSAAFTSFLKN CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]