Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is bcr [C]
Identifier: 159185315
GI number: 159185315
Start: 2650002
End: 2651180
Strand: Direct
Name: bcr [C]
Synonym: Atu2666
Alternate gene names: 159185315
Gene position: 2650002-2651180 (Clockwise)
Preceding gene: 15889921
Following gene: 159185317
Centisome position: 93.26
GC content: 61.58
Gene sequence:
>1179_bases ATGTCGACAAAACGCACGGCCATTCTCGGCGCGTTGCTGACGGCGCTGGCGCCGATTTCCATGGCGATCTATACGCCGGC CATGCCGGAACTGACGCGGGTTTTCGCCACGAATGAATCCGCGATAAAGCTCAGCCTCTCGCTTTATTTCGCCGGTTTCG CCCTGGCGCAGCTGCTCGCCGGCCCTGCTTCCGATGCCTTTGGCCGGCGCAGGGCGAGCCTCGTTTTCCTGTCAGTCTTT CTGGGCGGCGGACTGCTGGCGATTTTTGCCCCGACGATAGAAGTGCTGCTCCTCGCGCGGCTCATTCAGGGCATCGGCGC CTCCGTCGGCATGACGGTGGCACGCGCTATCGTACGCGACCAGTTTACTGGCGCGGAAGCCTCCAGCATCATGAACCTCA TCGGCATCATGCTGGCAGTCGGCCCCGCCCTCGGACCAACGATCGGTGGGCTTTCGCTTGCGGCTTTCGGCTGGAAATCG GTGTTTTTCCTCATGGCCGGTCTCGGCGCCGCCGCCATCTTCTCCGTCGTGATTTTTCTGCGCGAAACAACGGTCCCGGA CAAAAGCCTTATCCGCCCCCGTCGCCTCCTGTCGGCCTACGGCAACTTGCTGACCGAACCACGCTTTCTTCTGGCCGCCC TCGTGCTCGGCGGTTCCATCGGCGCACTTTATGCGCAGGCCACCATGCTGACCTTCATTCTCATCAACACGGTTGGCATG ACACCCACCGCCTTCGGCATCGGCATGCTGATGCAGACCGGCGCTTATTTCTTCGGCTCCATCGCCCTGCGGTACATCGC ACCGCGACTGGGTGATCGCCGTTCGGTCATGCTCGGCCTCTGTTTTTCGGGAACAGGCGGTCTGCTCATCCTGCTGTCGG TCTTCCTGATACCGCCGTCCTTCTTTTCCATCATGGGACCCGTGGCGGTCGCAACGGTCGGTATCGCCTTGCTGACACCC TCAATGGTAACGGCAGCGCTTGCACCCTTCCCCCATATTGCCGGCTCGGCCTCGGCGATGATGGGCTTCATCCAGATGGG ATCGGGTTTTGCGGGCGGCACCGCTGCCTCGCTCATCGGTTCACCCTTGACAGGCTTCGGCATCGTCATCCCGGTGATGG AATTCACCGCTGTTGCCAGCTACATCGGCTTCCGCATCGTCTCCAGAAGCAAGACATGA
Upstream 100 bases:
>100_bases AAGTTGCGCTTTTCCGCAGCTTCCTGCAGACGCTTCGCGACAATCTCCAGCCTGAACAGCCGGGCCAGAGCTGCTGACCA CAATGCCGCCAGAACCGATC
Downstream 100 bases:
>100_bases AAAAACCCGCCGGCGTCACCGCCCGCGGGTTTCATAATCTTTACGTCAGCTGAATTACTTGTTGAGGTTACGCTTGGCGA GCGTGCGAAGACGCAGCGCA
Product: MFS permease
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MSTKRTAILGALLTALAPISMAIYTPAMPELTRVFATNESAIKLSLSLYFAGFALAQLLAGPASDAFGRRRASLVFLSVF LGGGLLAIFAPTIEVLLLARLIQGIGASVGMTVARAIVRDQFTGAEASSIMNLIGIMLAVGPALGPTIGGLSLAAFGWKS VFFLMAGLGAAAIFSVVIFLRETTVPDKSLIRPRRLLSAYGNLLTEPRFLLAALVLGGSIGALYAQATMLTFILINTVGM TPTAFGIGMLMQTGAYFFGSIALRYIAPRLGDRRSVMLGLCFSGTGGLLILLSVFLIPPSFFSIMGPVAVATVGIALLTP SMVTAALAPFPHIAGSASAMMGFIQMGSGFAGGTAASLIGSPLTGFGIVIPVMEFTAVASYIGFRIVSRSKT
Sequences:
>Translated_392_residues MSTKRTAILGALLTALAPISMAIYTPAMPELTRVFATNESAIKLSLSLYFAGFALAQLLAGPASDAFGRRRASLVFLSVF LGGGLLAIFAPTIEVLLLARLIQGIGASVGMTVARAIVRDQFTGAEASSIMNLIGIMLAVGPALGPTIGGLSLAAFGWKS VFFLMAGLGAAAIFSVVIFLRETTVPDKSLIRPRRLLSAYGNLLTEPRFLLAALVLGGSIGALYAQATMLTFILINTVGM TPTAFGIGMLMQTGAYFFGSIALRYIAPRLGDRRSVMLGLCFSGTGGLLILLSVFLIPPSFFSIMGPVAVATVGIALLTP SMVTAALAPFPHIAGSASAMMGFIQMGSGFAGGTAASLIGSPLTGFGIVIPVMEFTAVASYIGFRIVSRSKT >Mature_391_residues STKRTAILGALLTALAPISMAIYTPAMPELTRVFATNESAIKLSLSLYFAGFALAQLLAGPASDAFGRRRASLVFLSVFL GGGLLAIFAPTIEVLLLARLIQGIGASVGMTVARAIVRDQFTGAEASSIMNLIGIMLAVGPALGPTIGGLSLAAFGWKSV FFLMAGLGAAAIFSVVIFLRETTVPDKSLIRPRRLLSAYGNLLTEPRFLLAALVLGGSIGALYAQATMLTFILINTVGMT PTAFGIGMLMQTGAYFFGSIALRYIAPRLGDRRSVMLGLCFSGTGGLLILLSVFLIPPSFFSIMGPVAVATVGIALLTPS MVTAALAPFPHIAGSASAMMGFIQMGSGFAGGTAASLIGSPLTGFGIVIPVMEFTAVASYIGFRIVSRSKT
Specific function: Involved In Sulfonamide (Sulfathiazole) And Bicyclomycin Resistance. Probable Membrane Translocase. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Bcr/CmlA family [H]
Homologues:
Organism=Escherichia coli, GI1788509, Length=358, Percent_Identity=26.8156424581006, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI48994889, Length=363, Percent_Identity=27.2727272727273, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI87082312, Length=360, Percent_Identity=28.6111111111111, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1790146, Length=206, Percent_Identity=28.6407766990291, Blast_Score=85, Evalue=8e-18, Organism=Escherichia coli, GI1787065, Length=326, Percent_Identity=26.3803680981595, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790794, Length=230, Percent_Identity=24.3478260869565, Blast_Score=62, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6324264, Length=179, Percent_Identity=25.6983240223464, Blast_Score=64, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004812 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 40540; Mature: 40409
Theoretical pI: Translated: 11.21; Mature: 11.21
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKRTAILGALLTALAPISMAIYTPAMPELTRVFATNESAIKLSLSLYFAGFALAQLLA CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHC GPASDAFGRRRASLVFLSVFLGGGLLAIFAPTIEVLLLARLIQGIGASVGMTVARAIVRD CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH QFTGAEASSIMNLIGIMLAVGPALGPTIGGLSLAAFGWKSVFFLMAGLGAAAIFSVVIFL HCCCCHHHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RETTVPDKSLIRPRRLLSAYGNLLTEPRFLLAALVLGGSIGALYAQATMLTFILINTVGM HHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC TPTAFGIGMLMQTGAYFFGSIALRYIAPRLGDRRSVMLGLCFSGTGGLLILLSVFLIPPS CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHCHH FFSIMGPVAVATVGIALLTPSMVTAALAPFPHIAGSASAMMGFIQMGSGFAGGTAASLIG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHC SPLTGFGIVIPVMEFTAVASYIGFRIVSRSKT CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure STKRTAILGALLTALAPISMAIYTPAMPELTRVFATNESAIKLSLSLYFAGFALAQLLA CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHC GPASDAFGRRRASLVFLSVFLGGGLLAIFAPTIEVLLLARLIQGIGASVGMTVARAIVRD CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH QFTGAEASSIMNLIGIMLAVGPALGPTIGGLSLAAFGWKSVFFLMAGLGAAAIFSVVIFL HCCCCHHHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RETTVPDKSLIRPRRLLSAYGNLLTEPRFLLAALVLGGSIGALYAQATMLTFILINTVGM HHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC TPTAFGIGMLMQTGAYFFGSIALRYIAPRLGDRRSVMLGLCFSGTGGLLILLSVFLIPPS CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHCHH FFSIMGPVAVATVGIALLTPSMVTAALAPFPHIAGSASAMMGFIQMGSGFAGGTAASLIG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHC SPLTGFGIVIPVMEFTAVASYIGFRIVSRSKT CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA