Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185240
Identifier: 159185240
GI number: 159185240
Start: 2460016
End: 2460399
Strand: Reverse
Name: 159185240
Synonym: Atu2491
Alternate gene names: NA
Gene position: 2460399-2460016 (Counterclockwise)
Preceding gene: 15889761
Following gene: 159185239
Centisome position: 86.59
GC content: 53.12
Gene sequence:
>384_bases ATGCTTTCGGATTATGACTTTAGTCTAAGGGACGGTATCCCGAAAATGTCGCGCGGTGCGGTTTGGCTGTCGTTCAGGTG GCCTTTCGATGCGCCTTTTTCCTTGACACAAAGAAGAAACCTTCTAATAGCTTCTCGCGAAGAAGGAGCATCACCTTGCG CACGCATGTTTCAGACATGTTCGTCATGGAAGGACCGGCACAATCCGCCGGCGATGATCCGCGCCTTTCTTATTCCATCC GAATTACGGCCAAAACGACGATTAAAACCGTCTGACGTCTCTGGCCACCGCTCTCTCCCCGGTTTGGCTGGGGATCGAGG AAGCCGCAATGCGATGCGGGTTCCCCACCTCACCCAAAAGAGGAGAGACAGAAAGAGAGCTTGA
Upstream 100 bases:
>100_bases AATCGACGCATTGCGGAGCCCGTCTCTCTCCTTCGGACTCACCTTGCGGCTGCGATGCGCGTGACATCAGAGTGACAGAA AATTAACCCCAGTAAGAGCG
Downstream 100 bases:
>100_bases TCATGGGTTTCAAAGTTGCAATTGTAGGCGCTACCGGCAATGTCGGTCGCGAAATGCTCAACATCCTGGCCGAACGTGGT TTTCCGGCAGATGAAGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MLSDYDFSLRDGIPKMSRGAVWLSFRWPFDAPFSLTQRRNLLIASREEGASPCARMFQTCSSWKDRHNPPAMIRAFLIPS ELRPKRRLKPSDVSGHRSLPGLAGDRGSRNAMRVPHLTQKRRDRKRA
Sequences:
>Translated_127_residues MLSDYDFSLRDGIPKMSRGAVWLSFRWPFDAPFSLTQRRNLLIASREEGASPCARMFQTCSSWKDRHNPPAMIRAFLIPS ELRPKRRLKPSDVSGHRSLPGLAGDRGSRNAMRVPHLTQKRRDRKRA >Mature_127_residues MLSDYDFSLRDGIPKMSRGAVWLSFRWPFDAPFSLTQRRNLLIASREEGASPCARMFQTCSSWKDRHNPPAMIRAFLIPS ELRPKRRLKPSDVSGHRSLPGLAGDRGSRNAMRVPHLTQKRRDRKRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14633; Mature: 14633
Theoretical pI: Translated: 12.06; Mature: 12.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSDYDFSLRDGIPKMSRGAVWLSFRWPFDAPFSLTQRRNLLIASREEGASPCARMFQTC CCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHH SSWKDRHNPPAMIRAFLIPSELRPKRRLKPSDVSGHRSLPGLAGDRGSRNAMRVPHLTQK HHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH RRDRKRA HHHHCCC >Mature Secondary Structure MLSDYDFSLRDGIPKMSRGAVWLSFRWPFDAPFSLTQRRNLLIASREEGASPCARMFQTC CCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHH SSWKDRHNPPAMIRAFLIPSELRPKRRLKPSDVSGHRSLPGLAGDRGSRNAMRVPHLTQK HHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH RRDRKRA HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA