Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185219
Identifier: 159185219
GI number: 159185219
Start: 2421984
End: 2422307
Strand: Reverse
Name: 159185219
Synonym: Atu2450
Alternate gene names: NA
Gene position: 2422307-2421984 (Counterclockwise)
Preceding gene: 159185221
Following gene: 159185218
Centisome position: 85.25
GC content: 54.01
Gene sequence:
>324_bases ATGGGTGTGTCACAGGCTAAAATGTCGGAGCCGGGGCCGCATCGTCTGCAAAACCCTGCAATACCATCTGATACCCCGCA GCGATGCGGCCCATCATCGTTTCCAACGTTGCCCGGAATCCGTGGTGACGGTGCTCGCGCATATTCGAAAAAAAGCATCC GCTGTCCAAAAATGAAAACCGATAAAATTGTAGCAATCGGCTTAAAGCGGCTGAAAACAGTGGTGTGCCATTGTGGGATC ACAGACAGGGAGTGGCCTTTGAAGAGGCGCTCCGGAAACGAAATCGAGACCGGCACAAGCCGGCGGATCGCAAACGGGGT ATGA
Upstream 100 bases:
>100_bases GCGCAAGGTGGGCGGGGCAGGCGGCCGAGACCGGGGAGTTTCCCAATGTCACGGTTGAGGCGGCCGGCATGTGTCCATCC TTCAAACAGGAACCGGTTTG
Downstream 100 bases:
>100_bases AATGTTGAAGAAGATTATTGCTGCCGCCATCTGCGGAATTGCCATTGCCTCCATGTCCACCCATGCCGATGCGGCGGGTG CTGCCGGTTTTGCTCGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MGVSQAKMSEPGPHRLQNPAIPSDTPQRCGPSSFPTLPGIRGDGARAYSKKSIRCPKMKTDKIVAIGLKRLKTVVCHCGI TDREWPLKRRSGNEIETGTSRRIANGV
Sequences:
>Translated_107_residues MGVSQAKMSEPGPHRLQNPAIPSDTPQRCGPSSFPTLPGIRGDGARAYSKKSIRCPKMKTDKIVAIGLKRLKTVVCHCGI TDREWPLKRRSGNEIETGTSRRIANGV >Mature_106_residues GVSQAKMSEPGPHRLQNPAIPSDTPQRCGPSSFPTLPGIRGDGARAYSKKSIRCPKMKTDKIVAIGLKRLKTVVCHCGIT DREWPLKRRSGNEIETGTSRRIANGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11654; Mature: 11522
Theoretical pI: Translated: 11.05; Mature: 11.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVSQAKMSEPGPHRLQNPAIPSDTPQRCGPSSFPTLPGIRGDGARAYSKKSIRCPKMKT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DKIVAIGLKRLKTVVCHCGITDREWPLKRRSGNEIETGTSRRIANGV CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GVSQAKMSEPGPHRLQNPAIPSDTPQRCGPSSFPTLPGIRGDGARAYSKKSIRCPKMKT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DKIVAIGLKRLKTVVCHCGITDREWPLKRRSGNEIETGTSRRIANGV CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA