Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is mhqD [H]
Identifier: 159185221
GI number: 159185221
Start: 2423301
End: 2423915
Strand: Reverse
Name: mhqD [H]
Synonym: Atu2452
Alternate gene names: 159185221
Gene position: 2423915-2423301 (Counterclockwise)
Preceding gene: 159185222
Following gene: 159185219
Centisome position: 85.3
GC content: 61.79
Gene sequence:
>615_bases ATGACCAAGGATAGCTATTTCCACAAATCCCGCGCCGGCGTTGCGGGCGCCCCGCTTTTCGTTCTGCTGCACGGCACGGG CGGCGATGAGAACCAGTTCTTCGATTTCGGCGCGCGTCTTTTGCCGCAGGCCACCATTCTCTCGCCGGTCGGCGATGTCT CCGAACATGGCGCGGCGCGGTTCTTCCGGCGCACGGGCGAGGGTGTTTACGACATGGTCGATCTTGAACGGGCAACGGGC AAGATGGCCGATTTCATCAAGGCGAACCGCGAGCATTATCAGGCCGGGCCGGTGATCGGCCTCGGTTTTTCGAACGGCGC GAACATACTCGCCAATGTGCTGATCGAACAGCCGGAGCTTTTTGATGCGGCGGTGCTGATGCATCCGCTCATTCCGTTCG AGCCTAAGATTTCCCCGGCAAAACCCACGCGCCGCGTGCTGATTACGGCTGGCGAGCGTGATCCGATCTGCCCGGTGCAA CTAACCAAGGCTCTGGAGGAAAGCCTGAAGGCCCAGGGTGGCACGGTGGAAACCGTGTGGCACCCGGGCGGGCACGAAAT CCGCTCGGGCGAGATCGATGCGGTCAGGGGTTTTCTGGCGGCTTACGGGGGATAA
Upstream 100 bases:
>100_bases AGAAACAAGCGGCGCTCGCTCGCTCCATGAAATTGCTCCGCCTGCTGAAAAAGCGGTGCGGAAGCCGTTGAACCTTCTTC CTTTCAGAAAGGATACTCCC
Downstream 100 bases:
>100_bases CGCACGCTGCTGGGGATTTTCCTAGAGAATCGTCAGGGCGGGTAATTTCCGCCCTGCCTCAGCGATATCCGCACTGCTGT AGCTGTGCCTCGTAACGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MTKDSYFHKSRAGVAGAPLFVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATG KMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEPKISPAKPTRRVLITAGERDPICPVQ LTKALEESLKAQGGTVETVWHPGGHEIRSGEIDAVRGFLAAYGG
Sequences:
>Translated_204_residues MTKDSYFHKSRAGVAGAPLFVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATG KMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEPKISPAKPTRRVLITAGERDPICPVQ LTKALEESLKAQGGTVETVWHPGGHEIRSGEIDAVRGFLAAYGG >Mature_203_residues TKDSYFHKSRAGVAGAPLFVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGK MADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEPKISPAKPTRRVLITAGERDPICPVQL TKALEESLKAQGGTVETVWHPGGHEIRSGEIDAVRGFLAAYGG
Specific function: Putative hydrolase that may contribute to the degradation of aromatic compounds (Potential) [H]
COG id: COG0400
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003140 [H]
Pfam domain/function: PF02230 Abhydrolase_2 [H]
EC number: NA
Molecular weight: Translated: 21981; Mature: 21850
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKDSYFHKSRAGVAGAPLFVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEHGAAR CCCCCCCHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCHHHHHCCCCCHHHHHHHH FFRRTGEGVYDMVDLERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPEL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCH FDAAVLMHPLIPFEPKISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVW HHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEE HPGGHEIRSGEIDAVRGFLAAYGG CCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure TKDSYFHKSRAGVAGAPLFVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEHGAAR CCCCCCHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCHHHHHCCCCCHHHHHHHH FFRRTGEGVYDMVDLERATGKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPEL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCH FDAAVLMHPLIPFEPKISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVETVW HHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEE HPGGHEIRSGEIDAVRGFLAAYGG CCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9734814; 9384377 [H]