Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185218
Identifier: 159185218
GI number: 159185218
Start: 2421449
End: 2421982
Strand: Reverse
Name: 159185218
Synonym: Atu2449
Alternate gene names: NA
Gene position: 2421982-2421449 (Counterclockwise)
Preceding gene: 159185219
Following gene: 15889718
Centisome position: 85.23
GC content: 59.74
Gene sequence:
>534_bases ATGTTGAAGAAGATTATTGCTGCCGCCATCTGCGGAATTGCCATTGCCTCCATGTCCACCCATGCCGATGCGGCGGGTGC TGCCGGTTTTGCTCGCGGTTTCGCCGCAGTCGAAAAGTCCGCCGTGACTGCGATCGGTATTTCCGCACCCGGGGGTTTTG ATGGCTGCGTTCTTGCCGCCGGCCAGTGTGTTTCAACTATTGCCGCGCCGCTGACGGTCGAGCGCCGTGAGGAACTGCTG CGCGTCAACCGCGATGTGAACGCCACCATGGGCGCGCTTGATGATTATGTTTCCGGTTTTGCAACCGATCTTCCGGCAAC GCCATCCGTAAGTCTTGGTGATTGCGGTGACTGCGCGGCGATCAAGCGCACGGCCCTTGCCGGTGCCGGCTGGTCTTCCA ACGCGCTGCGGCTTGCCTTTGCACTCAAGGGTGACGGATCACTCGAAAAAGTGCTGATCGTTACCACCGACAAGGGCGAT ATCGTCCTTGGCAATGCAACCTTTTCTCCGGCCAGCCGCGAAACCGCGCTCTGA
Upstream 100 bases:
>100_bases TGCCATTGTGGGATCACAGACAGGGAGTGGCCTTTGAAGAGGCGCTCCGGAAACGAAATCGAGACCGGCACAAGCCGGCG GATCGCAAACGGGGTATGAA
Downstream 100 bases:
>100_bases CCTTTCCCTTCGGGCACCGGACAAGATTTTCGATCCGATGCCCCACCCATTCATGCCTGCCAGACTGCGCCGGTTTTCCT GATCCTCGTTGGTTCAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MLKKIIAAAICGIAIASMSTHADAAGAAGFARGFAAVEKSAVTAIGISAPGGFDGCVLAAGQCVSTIAAPLTVERREELL RVNRDVNATMGALDDYVSGFATDLPATPSVSLGDCGDCAAIKRTALAGAGWSSNALRLAFALKGDGSLEKVLIVTTDKGD IVLGNATFSPASRETAL
Sequences:
>Translated_177_residues MLKKIIAAAICGIAIASMSTHADAAGAAGFARGFAAVEKSAVTAIGISAPGGFDGCVLAAGQCVSTIAAPLTVERREELL RVNRDVNATMGALDDYVSGFATDLPATPSVSLGDCGDCAAIKRTALAGAGWSSNALRLAFALKGDGSLEKVLIVTTDKGD IVLGNATFSPASRETAL >Mature_177_residues MLKKIIAAAICGIAIASMSTHADAAGAAGFARGFAAVEKSAVTAIGISAPGGFDGCVLAAGQCVSTIAAPLTVERREELL RVNRDVNATMGALDDYVSGFATDLPATPSVSLGDCGDCAAIKRTALAGAGWSSNALRLAFALKGDGSLEKVLIVTTDKGD IVLGNATFSPASRETAL
Specific function: Unknown
COG id: COG3672
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17716; Mature: 17716
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKIIAAAICGIAIASMSTHADAAGAAGFARGFAAVEKSAVTAIGISAPGGFDGCVLAA CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHH GQCVSTIAAPLTVERREELLRVNRDVNATMGALDDYVSGFATDLPATPSVSLGDCGDCAA HHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH IKRTALAGAGWSSNALRLAFALKGDGSLEKVLIVTTDKGDIVLGNATFSPASRETAL HHHHHHCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCEEECCCCCCCCCCCCCC >Mature Secondary Structure MLKKIIAAAICGIAIASMSTHADAAGAAGFARGFAAVEKSAVTAIGISAPGGFDGCVLAA CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHH GQCVSTIAAPLTVERREELLRVNRDVNATMGALDDYVSGFATDLPATPSVSLGDCGDCAA HHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH IKRTALAGAGWSSNALRLAFALKGDGSLEKVLIVTTDKGDIVLGNATFSPASRETAL HHHHHHCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA