Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is gpt
Identifier: 159184890
GI number: 159184890
Start: 1716161
End: 1716658
Strand: Direct
Name: gpt
Synonym: Atu1731
Alternate gene names: 159184890
Gene position: 1716161-1716658 (Clockwise)
Preceding gene: 15889035
Following gene: 15889037
Centisome position: 60.39
GC content: 59.64
Gene sequence:
>498_bases ATGTCCCTTCCCGATAAAGCCTTTCCCGTCTCCTGGGACCAGTTCCACCGTGATGCCCGTGCACTTGCCTGGCGTCTTGC CGGTCTCGACAAAGAGTTCCGGGCGATCGTCTGTATTACCCGCGGCGGCCTCGTTCCGGCGGCGATCATTTCCCGCGAAC TGAACATCCGCATGATCGACACTGTCTGCATCGCCACGCGTCATGACTATGTCAACCAGGGCGACACGGTTCTTTTGAAG GGCGTGGCCCCGGAACTGACGACCGATGCCGGCGAAGGCGTGCTTGTCGTCGATGATCTCACCGATACCGGCAAGACGGC GCTGGAAGTGCGCGAAATGCTGCCGAGGGCGCATTTCGCCTGTGTTTACGCCAAGCCGAAGGGCGTGCCGACCATTGACA CTTTTGTCACTGAAGTCAGCCAGGACACCTGGATTTATTTTCCCTGGGACATGGGCTTCACCTATCAGGAGCCGATCGCC AAGGGATCGCGCGGCTGA
Upstream 100 bases:
>100_bases CAATCTCCCGCTCTCGCCTTTACGCGGAACGCTTGCCTTTTTGCCGTTCTTGCGGCTATTAGCCAAAGCCATCGACAATT TTGACCAGATGGTAGACGAC
Downstream 100 bases:
>100_bases TTGCCAGTCTCCACTGATATCCGCTCTTAAAAGCCGCCCCACCGAGGGCGGTTTTTTGTGGAGAAACGTCTTTTTTGAAA GCTGCGGAAAACACGGAAAA
Product: xanthine-guanine phosphoribosyltransferase
Products: NA
Alternate protein names: Xanthine-guanine phosphoribosyltransferase; XGPRT
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSLPDKAFPVSWDQFHRDARALAWRLAGLDKEFRAIVCITRGGLVPAAIISRELNIRMIDTVCIATRHDYVNQGDTVLLK GVAPELTTDAGEGVLVVDDLTDTGKTALEVREMLPRAHFACVYAKPKGVPTIDTFVTEVSQDTWIYFPWDMGFTYQEPIA KGSRG
Sequences:
>Translated_165_residues MSLPDKAFPVSWDQFHRDARALAWRLAGLDKEFRAIVCITRGGLVPAAIISRELNIRMIDTVCIATRHDYVNQGDTVLLK GVAPELTTDAGEGVLVVDDLTDTGKTALEVREMLPRAHFACVYAKPKGVPTIDTFVTEVSQDTWIYFPWDMGFTYQEPIA KGSRG >Mature_164_residues SLPDKAFPVSWDQFHRDARALAWRLAGLDKEFRAIVCITRGGLVPAAIISRELNIRMIDTVCIATRHDYVNQGDTVLLKG VAPELTTDAGEGVLVVDDLTDTGKTALEVREMLPRAHFACVYAKPKGVPTIDTFVTEVSQDTWIYFPWDMGFTYQEPIAK GSRG
Specific function: Acts on guanine, xanthine and to a lesser extent hypoxanthine
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily
Homologues:
Organism=Escherichia coli, GI1786433, Length=155, Percent_Identity=45.1612903225806, Blast_Score=144, Evalue=4e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): XGPT_AGRT5 (Q8UEM6)
Other databases:
- EMBL: AE007869 - PIR: AD2789 - PIR: E97568 - RefSeq: NP_354717.2 - ProteinModelPortal: Q8UEM6 - SMR: Q8UEM6 - STRING: Q8UEM6 - GeneID: 1133769 - GenomeReviews: AE007869_GR - KEGG: atu:Atu1731 - eggNOG: COG0503 - HOGENOM: HBG503428 - OMA: LVDTFIT - PhylomeDB: Q8UEM6 - ProtClustDB: PRK09177 - BioCyc: ATUM176299-1:ATU1731-MONOMER - HAMAP: MF_01903 - InterPro: IPR000836
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.4.2.22
Molecular weight: Translated: 18328; Mature: 18197
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER; PS00847 MCM_1
Important sites: BINDING 102-102 BINDING 145-145
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPDKAFPVSWDQFHRDARALAWRLAGLDKEFRAIVCITRGGLVPAAIISRELNIRMID CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHCCCCEEEEE TVCIATRHDYVNQGDTVLLKGVAPELTTDAGEGVLVVDDLTDTGKTALEVREMLPRAHFA EEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEE CVYAKPKGVPTIDTFVTEVSQDTWIYFPWDMGFTYQEPIAKGSRG EEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure SLPDKAFPVSWDQFHRDARALAWRLAGLDKEFRAIVCITRGGLVPAAIISRELNIRMID CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHCCCCEEEEE TVCIATRHDYVNQGDTVLLKGVAPELTTDAGEGVLVVDDLTDTGKTALEVREMLPRAHFA EEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEE CVYAKPKGVPTIDTFVTEVSQDTWIYFPWDMGFTYQEPIAKGSRG EEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194