Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889035
Identifier: 15889035
GI number: 15889035
Start: 1715189
End: 1716034
Strand: Direct
Name: 15889035
Synonym: Atu1730
Alternate gene names: NA
Gene position: 1715189-1716034 (Clockwise)
Preceding gene: 159184889
Following gene: 159184890
Centisome position: 60.36
GC content: 62.53
Gene sequence:
>846_bases ATGGGTTACAAAACGATACTGGCAGTGGTCGACAATGTTTCGAACACGCAGAAGCTCGGCGAATTCGTGGTGAGCCTTGC CGATCAGTTTTCCTCGCATGTGATCGGCCTGCATATGGAAACGCTTGCCGCCGTCCCGCTTGTCGCGCCGATGGAAATTC CCGATCCCGCCACCGTGCAGGCGCTGCAGGACGTGGCGCACAAGGAAACTACCGATGTCGGCACGCTTTTCGAGCGCACG CTCTCGACCAACGGCATCTCGCATGAATGGCGCAGCTTCGTCACGTCGGTCGGTTACGCCTCCGCCTCCGCCATTGACAG CGCCCGCTGCGCCGACCTCATCGTCGCGCGCCAGAGCAGCTCGTCGGCACTGTCCGACAGTCGCTCGGATATTGACGGTT TTCTTTATGAAAGCGGTCGCCCCGTTCTCCTCGTGCCGCATGTGCTGACCGTCGCCAAACCGATCAAGCGCGTCCTGATC GCCTGGAACGGCTCCCGCGAGGCGACCCGCGCTACCTTCGACGCCCTGCCCTTCCTGAAGGCGGCCGACAGCGTCGAGAT TTTCTCCGTCGACCAGTCCGAAAGCGAAACGCAGTCTGCGGGCCTTGCCGGTGCGGAACTCGCCGCCACGCTTGCCCGCC ACGGCGTTAACGTCACGGTCACCTCACAGGAAAAGATCGCCGGGCTTTCGCCGCAGGCCGCCATCGAGAACCGCCTGTCC GACAACAGCATCGACCTTCTGGTCATGGGTGCCTATGGCCATTCCCGCTGGTGGGAACTGCTGTTCGGCGGCGTGACGCG CACGCTGCTCGATTCCATGACGGCGATGACGTTGCTGTCGCGTTAA
Upstream 100 bases:
>100_bases TGCAACCGCCTGAGAGGCGCGGAGTTGACCAAAATCAAGGTGGCCATCGGCAAAGACGGCCATTCTCCCCACAGCAACAG ATGTCACCGAGGAGAAAGAA
Downstream 100 bases:
>100_bases AAACGGATGCGGCGCAAACAGCGCCGCAATCTCCCGCTCTCGCCTTTACGCGGAACGCTTGCCTTTTTGCCGTTCTTGCG GCTATTAGCCAAAGCCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family; Universal Stress Protein Family Protein; Universal Stress Family Protein; Universal Stress UspA Protein; Universal Stress Protein UspA Family UspA; UspA Stress Protein; UspA-Like Protein; Universal Stress Protein UspA Family; Universal Stress Family; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like; Universal Stress Related Protein
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MGYKTILAVVDNVSNTQKLGEFVVSLADQFSSHVIGLHMETLAAVPLVAPMEIPDPATVQALQDVAHKETTDVGTLFERT LSTNGISHEWRSFVTSVGYASASAIDSARCADLIVARQSSSSALSDSRSDIDGFLYESGRPVLLVPHVLTVAKPIKRVLI AWNGSREATRATFDALPFLKAADSVEIFSVDQSESETQSAGLAGAELAATLARHGVNVTVTSQEKIAGLSPQAAIENRLS DNSIDLLVMGAYGHSRWWELLFGGVTRTLLDSMTAMTLLSR
Sequences:
>Translated_281_residues MGYKTILAVVDNVSNTQKLGEFVVSLADQFSSHVIGLHMETLAAVPLVAPMEIPDPATVQALQDVAHKETTDVGTLFERT LSTNGISHEWRSFVTSVGYASASAIDSARCADLIVARQSSSSALSDSRSDIDGFLYESGRPVLLVPHVLTVAKPIKRVLI AWNGSREATRATFDALPFLKAADSVEIFSVDQSESETQSAGLAGAELAATLARHGVNVTVTSQEKIAGLSPQAAIENRLS DNSIDLLVMGAYGHSRWWELLFGGVTRTLLDSMTAMTLLSR >Mature_280_residues GYKTILAVVDNVSNTQKLGEFVVSLADQFSSHVIGLHMETLAAVPLVAPMEIPDPATVQALQDVAHKETTDVGTLFERTL STNGISHEWRSFVTSVGYASASAIDSARCADLIVARQSSSSALSDSRSDIDGFLYESGRPVLLVPHVLTVAKPIKRVLIA WNGSREATRATFDALPFLKAADSVEIFSVDQSESETQSAGLAGAELAATLARHGVNVTVTSQEKIAGLSPQAAIENRLSD NSIDLLVMGAYGHSRWWELLFGGVTRTLLDSMTAMTLLSR
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30060; Mature: 29929
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYKTILAVVDNVSNTQKLGEFVVSLADQFSSHVIGLHMETLAAVPLVAPMEIPDPATVQ CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH ALQDVAHKETTDVGTLFERTLSTNGISHEWRSFVTSVGYASASAIDSARCADLIVARQSS HHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC SSALSDSRSDIDGFLYESGRPVLLVPHVLTVAKPIKRVLIAWNGSREATRATFDALPFLK CHHHHCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHH AADSVEIFSVDQSESETQSAGLAGAELAATLARHGVNVTVTSQEKIAGLSPQAAIENRLS CCCCEEEEECCCCCCHHHHCCCCHHHHHHHHHHCCCEEEEECHHHHCCCCHHHHHHHCCC DNSIDLLVMGAYGHSRWWELLFGGVTRTLLDSMTAMTLLSR CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GYKTILAVVDNVSNTQKLGEFVVSLADQFSSHVIGLHMETLAAVPLVAPMEIPDPATVQ CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH ALQDVAHKETTDVGTLFERTLSTNGISHEWRSFVTSVGYASASAIDSARCADLIVARQSS HHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC SSALSDSRSDIDGFLYESGRPVLLVPHVLTVAKPIKRVLIAWNGSREATRATFDALPFLK CHHHHCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHH AADSVEIFSVDQSESETQSAGLAGAELAATLARHGVNVTVTSQEKIAGLSPQAAIENRLS CCCCEEEEECCCCCCHHHHCCCCHHHHHHHHHHCCCEEEEECHHHHCCCCHHHHHHHCCC DNSIDLLVMGAYGHSRWWELLFGGVTRTLLDSMTAMTLLSR CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA