Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is cinA [C]
Identifier: 159184889
GI number: 159184889
Start: 1714310
End: 1715101
Strand: Direct
Name: cinA [C]
Synonym: Atu1729
Alternate gene names: 159184889
Gene position: 1714310-1715101 (Clockwise)
Preceding gene: 15889030
Following gene: 15889035
Centisome position: 60.33
GC content: 63.13
Gene sequence:
>792_bases ATGTCCAATCCCTCCTCCACCTCCTCCGTCGTGACTGCCGCCATGCTCGCCATCGGCGACGAACTGCTGTCCGGCCGCAC CAAGGACAAGAATATCGGCCACCTCGCGGATGTGCTCACCATGTCCGGCATTGACCTCAAGGAAGTCCGCATCGTCGCCG ACGAGGAGGAATCGATTGTCGAGGCGCTGAACGCGCTGCGCAGCCGTTATGATTATGTCTTTACCTCGGGCGGCATCGGC CCGACCCATGACGACATCACCGCGGACGCGATCTCTGCGGCATTCGGCCTGCCCTGCGAACACGATGCCGAGGCGCTGCG CCTCCTGGGCGACATGTATCGCGTCCGTGAGATGGAATTCACCGAGGCTCGCAAGCGCATGGCGCGTATGCCGAAAGGTG CTGCTCATATCGCCAACCCCGTTTCCGTCGCTCCCGGCTTCGTCATCGGCAATGTCTATGTCATGGCGGGCGTGCCGCAG GTTTTTCAGGCCATGCTCGACAATGTCATGCCGACCCTGCGCACCGGCGCAAAGGTCATGTCGCAGGCGGTGCGTTCGCC CTACGGCGAAGGCGATATCGGCACACCGCTGACCGCCATCCAGAAGGCGCATCCCGAAACCAGCATCGGCTCCTATCCGA AATATGACGGGCAGCGCTTCTCGACAGAGATCGTCGTGCGCGCCCGCGACGCCGGCCTGCTGAAGGCGGCAACCGAGGCG GTTGCGGCGATGATTGAAGCGATAGGCCAGGAGAAGCAGCTGGCCGCAAGCAAGGGCGATGCAACCGCCTGA
Upstream 100 bases:
>100_bases CCGGAGCGTCAACCATTTACAAAAAGACATTTTGCCAAAACCGCTTTGCATTCCCCGGGCGCAGGGCTAACGTCTGACAA AACAGATGACGAGTGCACCC
Downstream 100 bases:
>100_bases GAGGCGCGGAGTTGACCAAAATCAAGGTGGCCATCGGCAAAGACGGCCATTCTCCCCACAGCAACAGATGTCACCGAGGA GAAAGAAATGGGTTACAAAA
Product: putative molybdenum cofactor biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MSNPSSTSSVVTAAMLAIGDELLSGRTKDKNIGHLADVLTMSGIDLKEVRIVADEEESIVEALNALRSRYDYVFTSGGIG PTHDDITADAISAAFGLPCEHDAEALRLLGDMYRVREMEFTEARKRMARMPKGAAHIANPVSVAPGFVIGNVYVMAGVPQ VFQAMLDNVMPTLRTGAKVMSQAVRSPYGEGDIGTPLTAIQKAHPETSIGSYPKYDGQRFSTEIVVRARDAGLLKAATEA VAAMIEAIGQEKQLAASKGDATA
Sequences:
>Translated_263_residues MSNPSSTSSVVTAAMLAIGDELLSGRTKDKNIGHLADVLTMSGIDLKEVRIVADEEESIVEALNALRSRYDYVFTSGGIG PTHDDITADAISAAFGLPCEHDAEALRLLGDMYRVREMEFTEARKRMARMPKGAAHIANPVSVAPGFVIGNVYVMAGVPQ VFQAMLDNVMPTLRTGAKVMSQAVRSPYGEGDIGTPLTAIQKAHPETSIGSYPKYDGQRFSTEIVVRARDAGLLKAATEA VAAMIEAIGQEKQLAASKGDATA >Mature_262_residues SNPSSTSSVVTAAMLAIGDELLSGRTKDKNIGHLADVLTMSGIDLKEVRIVADEEESIVEALNALRSRYDYVFTSGGIGP THDDITADAISAAFGLPCEHDAEALRLLGDMYRVREMEFTEARKRMARMPKGAAHIANPVSVAPGFVIGNVYVMAGVPQV FQAMLDNVMPTLRTGAKVMSQAVRSPYGEGDIGTPLTAIQKAHPETSIGSYPKYDGQRFSTEIVVRARDAGLLKAATEAV AAMIEAIGQEKQLAASKGDATA
Specific function: Unknown
COG id: COG1058
COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CinA family [H]
Homologues:
Organism=Homo sapiens, GI296434309, Length=247, Percent_Identity=26.7206477732794, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI41872403, Length=247, Percent_Identity=26.7206477732794, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI41872389, Length=247, Percent_Identity=26.7206477732794, Blast_Score=92, Evalue=3e-19, Organism=Homo sapiens, GI296434312, Length=233, Percent_Identity=25.3218884120172, Blast_Score=77, Evalue=1e-14, Organism=Escherichia coli, GI1788583, Length=165, Percent_Identity=30.3030303030303, Blast_Score=78, Evalue=5e-16, Organism=Caenorhabditis elegans, GI71993974, Length=259, Percent_Identity=26.6409266409266, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI71993966, Length=259, Percent_Identity=26.6409266409266, Blast_Score=93, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6323832, Length=255, Percent_Identity=33.3333333333333, Blast_Score=133, Evalue=4e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001453 - InterPro: IPR023055 [H]
Pfam domain/function: PF00994 MoCF_biosynth [H]
EC number: NA
Molecular weight: Translated: 27942; Mature: 27811
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPSSTSSVVTAAMLAIGDELLSGRTKDKNIGHLADVLTMSGIDLKEVRIVADEEESIV CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHEEEEECCHHHHH EALNALRSRYDYVFTSGGIGPTHDDITADAISAAFGLPCEHDAEALRLLGDMYRVREMEF HHHHHHHHHHCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH TEARKRMARMPKGAAHIANPVSVAPGFVIGNVYVMAGVPQVFQAMLDNVMPTLRTGAKVM HHHHHHHHHCCCCHHHHCCCHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH SQAVRSPYGEGDIGTPLTAIQKAHPETSIGSYPKYDGQRFSTEIVVRARDAGLLKAATEA HHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHCCEEEEEECCCHHHHHHHHH VAAMIEAIGQEKQLAASKGDATA HHHHHHHHCCHHHHHHCCCCCCC >Mature Secondary Structure SNPSSTSSVVTAAMLAIGDELLSGRTKDKNIGHLADVLTMSGIDLKEVRIVADEEESIV CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHEEEEECCHHHHH EALNALRSRYDYVFTSGGIGPTHDDITADAISAAFGLPCEHDAEALRLLGDMYRVREMEF HHHHHHHHHHCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH TEARKRMARMPKGAAHIANPVSVAPGFVIGNVYVMAGVPQVFQAMLDNVMPTLRTGAKVM HHHHHHHHHCCCCHHHHCCCHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH SQAVRSPYGEGDIGTPLTAIQKAHPETSIGSYPKYDGQRFSTEIVVRARDAGLLKAATEA HHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHCCEEEEEECCCHHHHHHHHH VAAMIEAIGQEKQLAASKGDATA HHHHHHHHCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA