Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889030
Identifier: 15889030
GI number: 15889030
Start: 1712280
End: 1712585
Strand: Direct
Name: 15889030
Synonym: Atu1725
Alternate gene names: NA
Gene position: 1712280-1712585 (Clockwise)
Preceding gene: 159184886
Following gene: 159184889
Centisome position: 60.26
GC content: 60.13
Gene sequence:
>306_bases ATGAAAACGCTCCTATCATCGGCCGCTATCACGCTTTCACTGGCACTTTCTGGATGCACGACCGCCGGACCGGGCACCTA TTCCGGGCCTGCGCCCTATGTCGAACCCATCCCCGGCAGTATCATCTATCGGGGCCAGCCGCGCACCAAACTGACGAAAT CGCCGATCGGCAGCACCTTCACCCATGATTTCCGCATCGATGGGAGCACCAGAGCGGTAGAGACCTATCGCATTGCGCCT GACCGTTCGCTGGAACTCATCGACCGCCGCATCATTCGCGAATGGCTGTTCGGGCGCGACGACTGA
Upstream 100 bases:
>100_bases CGAAAGGCAAATAGCCGGGACGCATCATGCCCGATCTTCTTGCCCGCCGGGAACCGCAGCGCCTCCATATCGTTTTTATA GACGCACTTCGGAGGACAGG
Downstream 100 bases:
>100_bases CCGCACCGCAACGGTCAGAAACGGGCCGGGAGCGGGATTGCGCATCCTGGCCGCTTCGTTTAGAGCCGGGCGCAGCAACC AATATGGATAGGCGATGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MKTLLSSAAITLSLALSGCTTAGPGTYSGPAPYVEPIPGSIIYRGQPRTKLTKSPIGSTFTHDFRIDGSTRAVETYRIAP DRSLELIDRRIIREWLFGRDD
Sequences:
>Translated_101_residues MKTLLSSAAITLSLALSGCTTAGPGTYSGPAPYVEPIPGSIIYRGQPRTKLTKSPIGSTFTHDFRIDGSTRAVETYRIAP DRSLELIDRRIIREWLFGRDD >Mature_101_residues MKTLLSSAAITLSLALSGCTTAGPGTYSGPAPYVEPIPGSIIYRGQPRTKLTKSPIGSTFTHDFRIDGSTRAVETYRIAP DRSLELIDRRIIREWLFGRDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11071; Mature: 11071
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLLSSAAITLSLALSGCTTAGPGTYSGPAPYVEPIPGSIIYRGQPRTKLTKSPIGSTF CCCCHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC THDFRIDGSTRAVETYRIAPDRSLELIDRRIIREWLFGRDD EEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKTLLSSAAITLSLALSGCTTAGPGTYSGPAPYVEPIPGSIIYRGQPRTKLTKSPIGSTF CCCCHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC THDFRIDGSTRAVETYRIAPDRSLELIDRRIIREWLFGRDD EEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA