Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184857
Identifier: 159184857
GI number: 159184857
Start: 1638399
End: 1639484
Strand: Direct
Name: 159184857
Synonym: Atu1653
Alternate gene names: NA
Gene position: 1638399-1639484 (Clockwise)
Preceding gene: 159184856
Following gene: 159184860
Centisome position: 57.66
GC content: 62.34
Gene sequence:
>1086_bases CTGCTTCCCCTTGTTTTCACGGCTCCTGCCGCCGCTTTTGCGGAGCAGGTGTGCGATACGCTGTATCAACAGCTGCGCGA GCCGCCTCGCGTTATCGGCAACACGGCCGAGGTGCGGCGTTATGCCAATGCGCTCGCCCGCCAGAACATCGTCATCCGCA AGATCAGGAACGACATGCGCAGCTATGGCTGCTCATCAGGCAGCGTCATCGTTTATGGCAATCCCAATGCCAGCGTCTGC GCCGAGATCGGCGATGCGCTGGTGGATGCCGAGGCCGAACGTGACGCGATCATCCGCGATCGCGACGACGCCATGGCGGC AGCGCGCAATGACGACGGCGACGTCAGGCGCCAGCGCATTCTCGCCGCCCTCGATGCCAACGGTTGCAGCACAATGCCGG AAACGGACACGCGACTGCCGCAGGCTCCCGATGTGACGCGTTATCCCGATGCCTTCCGTCAGCAGGAAAATGAGCCGGGA CAGGCAGGCCTTTCGCCCTACCCCAATGCCGCCGCTGAGGGCGGGCTTCGCACACTCTGCGTGCGCACCTGCGACGGTTC ATTCTTCCCGATTGCCTCCAACGCCTCGCCGCTCGATTTCCGCGCCCAGGCCGAACAATGCCAGAAAATGTGCCCGGGAA CCGAGACGGAGCTTTATTTCCATTCCATGACGGATCAGGAAACAGCAGACATGGTGTCTGCGCAAACCGGCAAACCCTAC AAAGACCTGCCGACCGCCTTCGCCTATCGCAATTCCTCCCCGAAAGCGCCGGGCTGCGCCTGCAACATGGCCGCCTACCA CCAGGACATGCAGAAGCAGGAAGAGGCCGCCCGGCCGCAAGCCGAAAGGCCCTATTCCAGCATCAGCACCATTCCATCAC CCCAGGGTGACAAGAGTGGAGACAAGCCGCAGAAATCCGCCGAGCAGCAACAGGCCGCAAAGCCGCCGGAACAACCCGTT CCCGAACGCGACTATGACCCGAACGACACCAGGGTGCGCGTCATCGGCCCCAAATTCCTGCCGGATCAGACAGGCCGGAT AGACCTGAAGAACCCGGCACTTAAAGGCATTCAGCCGCAGCAGTGA
Upstream 100 bases:
>100_bases TCCCGAAACACGGATTTCCTGAAGCGTAACACCCCTGCCACCGGCCGGGGACATCAAACGGATCGCACAATTGACCCGGC GCAGCCGCATCATCGGCCTC
Downstream 100 bases:
>100_bases AATCTCTTGCGCGTGCGTAATGGGGCGAGCGCGCCCCTGTTTCTTCTCTCCGAGGGGGAGAAGTTCGTGACAGCGGGATG AAGGGGCAACGTCAGCGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MLPLVFTAPAAAFAEQVCDTLYQQLREPPRVIGNTAEVRRYANALARQNIVIRKIRNDMRSYGCSSGSVIVYGNPNASVC AEIGDALVDAEAERDAIIRDRDDAMAAARNDDGDVRRQRILAALDANGCSTMPETDTRLPQAPDVTRYPDAFRQQENEPG QAGLSPYPNAAAEGGLRTLCVRTCDGSFFPIASNASPLDFRAQAEQCQKMCPGTETELYFHSMTDQETADMVSAQTGKPY KDLPTAFAYRNSSPKAPGCACNMAAYHQDMQKQEEAARPQAERPYSSISTIPSPQGDKSGDKPQKSAEQQQAAKPPEQPV PERDYDPNDTRVRVIGPKFLPDQTGRIDLKNPALKGIQPQQ
Sequences:
>Translated_361_residues MLPLVFTAPAAAFAEQVCDTLYQQLREPPRVIGNTAEVRRYANALARQNIVIRKIRNDMRSYGCSSGSVIVYGNPNASVC AEIGDALVDAEAERDAIIRDRDDAMAAARNDDGDVRRQRILAALDANGCSTMPETDTRLPQAPDVTRYPDAFRQQENEPG QAGLSPYPNAAAEGGLRTLCVRTCDGSFFPIASNASPLDFRAQAEQCQKMCPGTETELYFHSMTDQETADMVSAQTGKPY KDLPTAFAYRNSSPKAPGCACNMAAYHQDMQKQEEAARPQAERPYSSISTIPSPQGDKSGDKPQKSAEQQQAAKPPEQPV PERDYDPNDTRVRVIGPKFLPDQTGRIDLKNPALKGIQPQQ >Mature_361_residues MLPLVFTAPAAAFAEQVCDTLYQQLREPPRVIGNTAEVRRYANALARQNIVIRKIRNDMRSYGCSSGSVIVYGNPNASVC AEIGDALVDAEAERDAIIRDRDDAMAAARNDDGDVRRQRILAALDANGCSTMPETDTRLPQAPDVTRYPDAFRQQENEPG QAGLSPYPNAAAEGGLRTLCVRTCDGSFFPIASNASPLDFRAQAEQCQKMCPGTETELYFHSMTDQETADMVSAQTGKPY KDLPTAFAYRNSSPKAPGCACNMAAYHQDMQKQEEAARPQAERPYSSISTIPSPQGDKSGDKPQKSAEQQQAAKPPEQPV PERDYDPNDTRVRVIGPKFLPDQTGRIDLKNPALKGIQPQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39499; Mature: 39499
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPLVFTAPAAAFAEQVCDTLYQQLREPPRVIGNTAEVRRYANALARQNIVIRKIRNDMR CCCEEECCHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SYGCSSGSVIVYGNPNASVCAEIGDALVDAEAERDAIIRDRDDAMAAARNDDGDVRRQRI HCCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHCHHHCCCHHHHHHHCCCCHHHHHHHH LAALDANGCSTMPETDTRLPQAPDVTRYPDAFRQQENEPGQAGLSPYPNAAAEGGLRTLC HHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHCCHHEEE VRTCDGSFFPIASNASPLDFRAQAEQCQKMCPGTETELYFHSMTDQETADMVSAQTGKPY EECCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCH KDLPTAFAYRNSSPKAPGCACNMAAYHQDMQKQEEAARPQAERPYSSISTIPSPQGDKSG HHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCC DKPQKSAEQQQAAKPPEQPVPERDYDPNDTRVRVIGPKFLPDQTGRIDLKNPALKGIQPQ CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCC Q C >Mature Secondary Structure MLPLVFTAPAAAFAEQVCDTLYQQLREPPRVIGNTAEVRRYANALARQNIVIRKIRNDMR CCCEEECCHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SYGCSSGSVIVYGNPNASVCAEIGDALVDAEAERDAIIRDRDDAMAAARNDDGDVRRQRI HCCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHCHHHCCCHHHHHHHCCCCHHHHHHHH LAALDANGCSTMPETDTRLPQAPDVTRYPDAFRQQENEPGQAGLSPYPNAAAEGGLRTLC HHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHCCHHEEE VRTCDGSFFPIASNASPLDFRAQAEQCQKMCPGTETELYFHSMTDQETADMVSAQTGKPY EECCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCH KDLPTAFAYRNSSPKAPGCACNMAAYHQDMQKQEEAARPQAERPYSSISTIPSPQGDKSG HHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCC DKPQKSAEQQQAAKPPEQPVPERDYDPNDTRVRVIGPKFLPDQTGRIDLKNPALKGIQPQ CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCC Q C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA