Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is cgmA [H]
Identifier: 159184860
GI number: 159184860
Start: 1643693
End: 1645486
Strand: Direct
Name: cgmA [H]
Synonym: Atu1658
Alternate gene names: 159184860
Gene position: 1643693-1645486 (Clockwise)
Preceding gene: 159184857
Following gene: 159184861
Centisome position: 57.84
GC content: 61.2
Gene sequence:
>1794_bases GTGGCGCTGGAATGGATCGCCCGCGGTTCGCTCCGTGATGTCGGCGCTTTCCTCACCTCCCCGGCCCGCCCGGGCGTAAC CACCATCGCCGCCGTGCTCGCCCTTCTCCTGGCGCTGGATGCGATCCTTGGCAGGCGTTACCTGTCGCTGATTGCCGTCG CGCCGCTCTGCGCGCTGACGGGACTGATTTCCGCCCAGAAACAGACTTATCTCTCCGATCCACTTTACCCTTCCGACCTT TTATTCGGCCGGCAGATCCTCGAGCTTCTGCCGACCATGTTGAAGGCCCAGCCCCTGACGGCAGCACTGGTGGTCCTCGG CCTCTGCGCCGCCATCGCAGCCCTTGTGGCGTTATGGCTGCTGGCGCGCCGCCATTCGCCGGGCTTGAGCTGGCGTGAGC GCGCCGCGGGTCTTGTGCTGGCGTTGCCGCTTCTCGCCGGTCTTGCCTCGCTGATGGACTATTCGCATTATTCCTGGGTG CGCGATCGCCTCAACATCATTCCCATGATGTGGGATCAGCAGGAGAACTACCGCCATAACGGCTTCCTGATGGCCTTCGC CTTTAATATCCCCATGGCCAATGTCGCGGCACCCGAGGGTTATGGCGACAACAGCATCGCCGACCTCACCTCGAAATCCG CTTCCTTCGCCGCCAACAAGGGCGATTACCCTGATGTCATCATGCTGATGAGCGAATCGCTATGGGATCCGACCCGGCTG GAGAATGTCGAACTTTCGGCCGATCCCATGCCGACCATCCGCGCCAAACAGTCCGGCAATGTGTTTTCGCCTGAGTTCGG CGGCATGACGGCCAATGTGGAATTTGAGGCGCTGACCGGTTTCTCCAACGCCTTCCTGCCCTATGGTAGCATTCCCTATC AGCAATATATCCGCCGTCCGGTGCCCTCGCTCGCAAGCTTCTTCCGGGGCGAAGGATATTCCGCCATCGCCATGCATCCG TTCCAGGAATGGTTCTGGAACCGCAAGCAGGTCTACAAGAATTTTGGCTTCGAGGAATTCCGCTCCGAAGAGACGCTGCC GGCGATGGAAAAACGCGGCAACTTCGCCTCCGACGATGCCTTGATGAACGAGATCATGGCGACCGCCGATACGGCGAAGA ACCCGCTCTTCCTCTTTGCCGTCACCCTGCAGGGACACGGCCCCTACGAAGCGGCCCGTTATGCCGAAAACACGATTGAT GTGACGGGCGGTCTTTCCGCCTCGGCCTCGCAGGCGCTTGCCACCTATTCGCAGGGTGTCGTGGAAGCCGATGACGCGTT GTTGAAACTGATGCGCTGGGCAAAGAAGCGTGACCGCGAAACCATCATCGTCCTCTTCGGCGATCACCTGCCGCCGCTCG GCCAGACCTTCGTGGAAAGCGGTTACATGCCGGGCATGGTGGCCAGCCGCCGCGCGCCGCTGGAGGTGATGAAGAAGGAA CACGAAACACCGCTCGTCGTCTGGTCCTCCAAGAAAGGCGTGCGCAAGAATATCGGCACCATCAGCCCGGCGCTCCTGCC CTATCATGTGTTGAAGACCGCGGGCTTCTCCGATCCTTTCTACACCGGCACGCTGGGTGACGTTCAGCAGGAATTCTCCG TCATCGACCGGCACATGCTGGTGGCGACGGATGGCGAGGCCATGCCCGACTGGTCGATCGCGCCGAACGCGGTTCCCGAT GTGGTGCGCGATTATCGCCTGCTGCAATTCGATATGATGTTCGGCGCGCAATATGGCCGCGAGCGTTTCTTCCCCGGCTT TAACTGGCTGCATGAGGGCGCACCGGCGGTGTGA
Upstream 100 bases:
>100_bases TGGTCTTGTCTTTTCGCCTGCGGGACTGAGGAGCCTTTCGAAGCTTTCGGGTACGGCCTATACGCTTGCCAATCTGACGA TCGCATCCATTGTGCTTGTC
Downstream 100 bases:
>100_bases TGGTTCTGGCTAGGGCGCCTGAACCGCATGGCGGTGGAAATCGTTTGAATTCCGCCACCATGCGGGTTTATCTCGGGAAA ACGCACAAGCACCCCCATCA
Product: cyclic glucan phosphoglycerol modification protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 597; Mature: 596
Protein sequence:
>597_residues MALEWIARGSLRDVGAFLTSPARPGVTTIAAVLALLLALDAILGRRYLSLIAVAPLCALTGLISAQKQTYLSDPLYPSDL LFGRQILELLPTMLKAQPLTAALVVLGLCAAIAALVALWLLARRHSPGLSWRERAAGLVLALPLLAGLASLMDYSHYSWV RDRLNIIPMMWDQQENYRHNGFLMAFAFNIPMANVAAPEGYGDNSIADLTSKSASFAANKGDYPDVIMLMSESLWDPTRL ENVELSADPMPTIRAKQSGNVFSPEFGGMTANVEFEALTGFSNAFLPYGSIPYQQYIRRPVPSLASFFRGEGYSAIAMHP FQEWFWNRKQVYKNFGFEEFRSEETLPAMEKRGNFASDDALMNEIMATADTAKNPLFLFAVTLQGHGPYEAARYAENTID VTGGLSASASQALATYSQGVVEADDALLKLMRWAKKRDRETIIVLFGDHLPPLGQTFVESGYMPGMVASRRAPLEVMKKE HETPLVVWSSKKGVRKNIGTISPALLPYHVLKTAGFSDPFYTGTLGDVQQEFSVIDRHMLVATDGEAMPDWSIAPNAVPD VVRDYRLLQFDMMFGAQYGRERFFPGFNWLHEGAPAV
Sequences:
>Translated_597_residues MALEWIARGSLRDVGAFLTSPARPGVTTIAAVLALLLALDAILGRRYLSLIAVAPLCALTGLISAQKQTYLSDPLYPSDL LFGRQILELLPTMLKAQPLTAALVVLGLCAAIAALVALWLLARRHSPGLSWRERAAGLVLALPLLAGLASLMDYSHYSWV RDRLNIIPMMWDQQENYRHNGFLMAFAFNIPMANVAAPEGYGDNSIADLTSKSASFAANKGDYPDVIMLMSESLWDPTRL ENVELSADPMPTIRAKQSGNVFSPEFGGMTANVEFEALTGFSNAFLPYGSIPYQQYIRRPVPSLASFFRGEGYSAIAMHP FQEWFWNRKQVYKNFGFEEFRSEETLPAMEKRGNFASDDALMNEIMATADTAKNPLFLFAVTLQGHGPYEAARYAENTID VTGGLSASASQALATYSQGVVEADDALLKLMRWAKKRDRETIIVLFGDHLPPLGQTFVESGYMPGMVASRRAPLEVMKKE HETPLVVWSSKKGVRKNIGTISPALLPYHVLKTAGFSDPFYTGTLGDVQQEFSVIDRHMLVATDGEAMPDWSIAPNAVPD VVRDYRLLQFDMMFGAQYGRERFFPGFNWLHEGAPAV >Mature_596_residues ALEWIARGSLRDVGAFLTSPARPGVTTIAAVLALLLALDAILGRRYLSLIAVAPLCALTGLISAQKQTYLSDPLYPSDLL FGRQILELLPTMLKAQPLTAALVVLGLCAAIAALVALWLLARRHSPGLSWRERAAGLVLALPLLAGLASLMDYSHYSWVR DRLNIIPMMWDQQENYRHNGFLMAFAFNIPMANVAAPEGYGDNSIADLTSKSASFAANKGDYPDVIMLMSESLWDPTRLE NVELSADPMPTIRAKQSGNVFSPEFGGMTANVEFEALTGFSNAFLPYGSIPYQQYIRRPVPSLASFFRGEGYSAIAMHPF QEWFWNRKQVYKNFGFEEFRSEETLPAMEKRGNFASDDALMNEIMATADTAKNPLFLFAVTLQGHGPYEAARYAENTIDV TGGLSASASQALATYSQGVVEADDALLKLMRWAKKRDRETIIVLFGDHLPPLGQTFVESGYMPGMVASRRAPLEVMKKEH ETPLVVWSSKKGVRKNIGTISPALLPYHVLKTAGFSDPFYTGTLGDVQQEFSVIDRHMLVATDGEAMPDWSIAPNAVPDV VRDYRLLQFDMMFGAQYGRERFFPGFNWLHEGAPAV
Specific function: Unknown
COG id: COG1368
COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 65906; Mature: 65774
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALEWIARGSLRDVGAFLTSPARPGVTTIAAVLALLLALDAILGRRYLSLIAVAPLCALT CCCCHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLISAQKQTYLSDPLYPSDLLFGRQILELLPTMLKAQPLTAALVVLGLCAAIAALVALWL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LARRHSPGLSWRERAAGLVLALPLLAGLASLMDYSHYSWVRDRLNIIPMMWDQQENYRHN HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC GFLMAFAFNIPMANVAAPEGYGDNSIADLTSKSASFAANKGDYPDVIMLMSESLWDPTRL CEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCHHHCCCCCCCCHHHHHHHHHCCCCCCC ENVELSADPMPTIRAKQSGNVFSPEFGGMTANVEFEALTGFSNAFLPYGSIPYQQYIRRP CCCEECCCCCCCEEECCCCCCCCCCCCCEEEEEEEHEECCCCCCCCCCCCCCHHHHHHCC VPSLASFFRGEGYSAIAMHPFQEWFWNRKQVYKNFGFEEFRSEETLPAMEKRGNFASDDA HHHHHHHHCCCCCCEEEECHHHHHHCCHHHHHHHCCHHHHCCCCCCHHHHHCCCCCCHHH LMNEIMATADTAKNPLFLFAVTLQGHGPYEAARYAENTIDVTGGLSASASQALATYSQGV HHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCC VEADDALLKLMRWAKKRDRETIIVLFGDHLPPLGQTFVESGYMPGMVASRRAPLEVMKKE HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCCCCHHHCCCCCHHHHHHC HETPLVVWSSKKGVRKNIGTISPALLPYHVLKTAGFSDPFYTGTLGDVQQEFSVIDRHML CCCCEEEECCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEE VATDGEAMPDWSIAPNAVPDVVRDYRLLQFDMMFGAQYGRERFFPGFNWLHEGAPAV EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCC >Mature Secondary Structure ALEWIARGSLRDVGAFLTSPARPGVTTIAAVLALLLALDAILGRRYLSLIAVAPLCALT CCCHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLISAQKQTYLSDPLYPSDLLFGRQILELLPTMLKAQPLTAALVVLGLCAAIAALVALWL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LARRHSPGLSWRERAAGLVLALPLLAGLASLMDYSHYSWVRDRLNIIPMMWDQQENYRHN HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC GFLMAFAFNIPMANVAAPEGYGDNSIADLTSKSASFAANKGDYPDVIMLMSESLWDPTRL CEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCHHHCCCCCCCCHHHHHHHHHCCCCCCC ENVELSADPMPTIRAKQSGNVFSPEFGGMTANVEFEALTGFSNAFLPYGSIPYQQYIRRP CCCEECCCCCCCEEECCCCCCCCCCCCCEEEEEEEHEECCCCCCCCCCCCCCHHHHHHCC VPSLASFFRGEGYSAIAMHPFQEWFWNRKQVYKNFGFEEFRSEETLPAMEKRGNFASDDA HHHHHHHHCCCCCCEEEECHHHHHHCCHHHHHHHCCHHHHCCCCCCHHHHHCCCCCCHHH LMNEIMATADTAKNPLFLFAVTLQGHGPYEAARYAENTIDVTGGLSASASQALATYSQGV HHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCC VEADDALLKLMRWAKKRDRETIIVLFGDHLPPLGQTFVESGYMPGMVASRRAPLEVMKKE HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCCCCHHHCCCCCHHHHHHC HETPLVVWSSKKGVRKNIGTISPALLPYHVLKTAGFSDPFYTGTLGDVQQEFSVIDRHML CCCCEEEECCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEE VATDGEAMPDWSIAPNAVPDVVRDYRLLQFDMMFGAQYGRERFFPGFNWLHEGAPAV EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10419956; 11481430 [H]