Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 159184756
Identifier: 159184756
GI number: 159184756
Start: 1423178
End: 1423495
Strand: Direct
Name: 159184756
Synonym: Atu1428
Alternate gene names: NA
Gene position: 1423178-1423495 (Clockwise)
Preceding gene: 17935327
Following gene: 159184757
Centisome position: 50.08
GC content: 54.09
Gene sequence:
>318_bases ATGTGGACCAGACATCATAAAAAAAGACGATTCGGCCGTTTGATCGTTCCGGCCATCACGATCGCTTTTCTTTCCTATTT CGGGTATCATTCCATCCATGGCGACTTCGGCCTGCAGGCGACGGAGCGGTTGGAGCGGCAGCGTTTGACCAGAACGGCTG AGCTTGCAAAGCTGACGCAGGCGCGCGTGGCGCTGGAGCGGCAGGTGGAATTGCTGAGCGACGGTTCGCTTGAACGCGAC ATGATCGACGAGATTTCCCGTTACCAGCTGAATATGTCCCGCACCGACGAAATCGTCATCATGAACACATATTTCTAA
Upstream 100 bases:
>100_bases TTCATGCCGATCTGCCGATTGGAATTTAAGGTCAACGGATAGTTAAACAATCCGGCTTAGTCTCAGAATCACGTTGTGCG TTTTAGGGCTTTTCTCCGGC
Downstream 100 bases:
>100_bases TTAACCTAAATCAAGTTAATTTAACATTTTTTATTTATTCACAGCATCTTAGCGTGAATATGTGCCATGCGTTTAAAGCA TTGCTGCATGGCATTTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Septum Formation Initiator Family Protein; Septum Formation Initiator Protein
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MWTRHHKKRRFGRLIVPAITIAFLSYFGYHSIHGDFGLQATERLERQRLTRTAELAKLTQARVALERQVELLSDGSLERD MIDEISRYQLNMSRTDEIVIMNTYF
Sequences:
>Translated_105_residues MWTRHHKKRRFGRLIVPAITIAFLSYFGYHSIHGDFGLQATERLERQRLTRTAELAKLTQARVALERQVELLSDGSLERD MIDEISRYQLNMSRTDEIVIMNTYF >Mature_105_residues MWTRHHKKRRFGRLIVPAITIAFLSYFGYHSIHGDFGLQATERLERQRLTRTAELAKLTQARVALERQVELLSDGSLERD MIDEISRYQLNMSRTDEIVIMNTYF
Specific function: Unknown
COG id: COG2919
COG function: function code D; Septum formation initiator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12430; Mature: 12430
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWTRHHKKRRFGRLIVPAITIAFLSYFGYHSIHGDFGLQATERLERQRLTRTAELAKLTQ CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ARVALERQVELLSDGSLERDMIDEISRYQLNMSRTDEIVIMNTYF HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCC >Mature Secondary Structure MWTRHHKKRRFGRLIVPAITIAFLSYFGYHSIHGDFGLQATERLERQRLTRTAELAKLTQ CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ARVALERQVELLSDGSLERDMIDEISRYQLNMSRTDEIVIMNTYF HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA