Click here to switch to the map view.

The map label for this gene is ybfB [H]

Identifier: 159184590

GI number: 159184590

Start: 1031469

End: 1032689

Strand: Reverse

Name: ybfB [H]

Synonym: Atu1040

Alternate gene names: 159184590

Gene position: 1032689-1031469 (Counterclockwise)

Preceding gene: 159184591

Following gene: 159184584

Centisome position: 36.34

GC content: 60.85

Gene sequence:

>1221_bases
ATGTTCATGTCGCAAGCCACACGCCAGACCATGCCCTGGCTGATCATCGCAGCCGGGTCGCTGATTGCGGTCATGACCTT
CGGTCCCCGTTCGGCCATGGGGTTCTTCCAGTTACCGATGCTTGCCGATACCGGCTGGGATCGTTCCACCTTCGGTCTTG
CCATGGCTTTGCAGAACCTGTTCTGGGGTCTTGGCCAGCCGTTCTTCGGCGCGATTGCGGATAAATACGGCACGGGCCGC
GTGCTCGTTCTGTCAGGCATTCTTTATGCCGCAGGTCTCGTCTGCATGTCCTTCGGCACCTCGCCCTTCTGGCTGCATTT
TGGCGGCGGCGTGCTTGTCGGGCTTGGCATTGCCGCCGGTTCCTTCAGCGTCATTCTTTCCGCCTTCGCGCGCCATGTCA
CGCCGCAGCAGCGCTCGCTTGCCTTCGGCATCGGTACGGCGGCGGGTTCGGCCGGCATGTTCCTGTTTGCACCTATCAGC
CAAGGGCTGATTTCCGCCTATGGATGGTCGGACAGCCTCGTCTGGCTGGCTGCCATGATGGTGCTCGTTCCGCTGCTGGC
ATGGCCGATGCGCGGCAATTCCTCCTCCGGCAGCCAGTCGCAGGCGCAGTTTCAGCAGACGGTGGGCGAAGCGCTGAAGG
AGGCGCTTGGCCACAAGAGCTATCTGCTTCTGACCACCGGTTTCTTCGTCTGCGGTTTTCAGGTGGCCTTCATAACAGCA
CATTTCCCGGCCTATCTCGGCGATATCGGCATAGAACCACGTTACGCGGTCATCGCCATGGCGCTGATCGGCTTCTTCAA
CATCATTGGGTCGCTTGCCGCCGGGGTTATCGCCCAGCGTTATTCGAAACCCTATCTGCTCGCCTATATCTATATTGCCC
GCTCGGTCGTGGTCACGGCCTTCCTGCTGCTGCCGCAATCGCCGCTTTCGGTCATCCTCTTCGCCTCCTTCATGGGCATT
CTGTGGCTTTCCACCGTGCCGCCCACCAATGCGCTGGTGGCGATCATGTTCGGCACCCGTCACCTCGGCATGCTGGGCGG
CGTGGTTTTCCTCACCCACCAGATCGGCTCGTTCCTAGGCGTCTGGCTGGGTGGCTTCCTTTATGACCGGTTCGGCACCT
ACGATATCGTCTGGTGGCTCGGCGTTGGCATGGGGATTTTTGCGGCCATCGTGCACTGGCCCATTCAGGAGCGACCGGCA
CCAAGGCCGGTTATGGCATGA

Upstream 100 bases:

>100_bases
GCTAGTGGGACAGCCTGACAAAAGATAATATTCATCCCATCATAGAGGAATCCGCAGCAAGCCATGGCCCTTTTTTTTGG
GTGCGCGCTGCGATGGGGGA

Downstream 100 bases:

>100_bases
GACTGGAGCGCATTTCCTGACGGAAAACCGGGGTCCACTTTTCCTGGAAATGCTCTAGACCGCTTTATCGAGAGCGGGCG
GCTCAGCCTTTCGCTCCAGC

Product: MFS permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MFMSQATRQTMPWLIIAAGSLIAVMTFGPRSAMGFFQLPMLADTGWDRSTFGLAMALQNLFWGLGQPFFGAIADKYGTGR
VLVLSGILYAAGLVCMSFGTSPFWLHFGGGVLVGLGIAAGSFSVILSAFARHVTPQQRSLAFGIGTAAGSAGMFLFAPIS
QGLISAYGWSDSLVWLAAMMVLVPLLAWPMRGNSSSGSQSQAQFQQTVGEALKEALGHKSYLLLTTGFFVCGFQVAFITA
HFPAYLGDIGIEPRYAVIAMALIGFFNIIGSLAAGVIAQRYSKPYLLAYIYIARSVVVTAFLLLPQSPLSVILFASFMGI
LWLSTVPPTNALVAIMFGTRHLGMLGGVVFLTHQIGSFLGVWLGGFLYDRFGTYDIVWWLGVGMGIFAAIVHWPIQERPA
PRPVMA

Sequences:

>Translated_406_residues
MFMSQATRQTMPWLIIAAGSLIAVMTFGPRSAMGFFQLPMLADTGWDRSTFGLAMALQNLFWGLGQPFFGAIADKYGTGR
VLVLSGILYAAGLVCMSFGTSPFWLHFGGGVLVGLGIAAGSFSVILSAFARHVTPQQRSLAFGIGTAAGSAGMFLFAPIS
QGLISAYGWSDSLVWLAAMMVLVPLLAWPMRGNSSSGSQSQAQFQQTVGEALKEALGHKSYLLLTTGFFVCGFQVAFITA
HFPAYLGDIGIEPRYAVIAMALIGFFNIIGSLAAGVIAQRYSKPYLLAYIYIARSVVVTAFLLLPQSPLSVILFASFMGI
LWLSTVPPTNALVAIMFGTRHLGMLGGVVFLTHQIGSFLGVWLGGFLYDRFGTYDIVWWLGVGMGIFAAIVHWPIQERPA
PRPVMA
>Mature_406_residues
MFMSQATRQTMPWLIIAAGSLIAVMTFGPRSAMGFFQLPMLADTGWDRSTFGLAMALQNLFWGLGQPFFGAIADKYGTGR
VLVLSGILYAAGLVCMSFGTSPFWLHFGGGVLVGLGIAAGSFSVILSAFARHVTPQQRSLAFGIGTAAGSAGMFLFAPIS
QGLISAYGWSDSLVWLAAMMVLVPLLAWPMRGNSSSGSQSQAQFQQTVGEALKEALGHKSYLLLTTGFFVCGFQVAFITA
HFPAYLGDIGIEPRYAVIAMALIGFFNIIGSLAAGVIAQRYSKPYLLAYIYIARSVVVTAFLLLPQSPLSVILFASFMGI
LWLSTVPPTNALVAIMFGTRHLGMLGGVVFLTHQIGSFLGVWLGGFLYDRFGTYDIVWWLGVGMGIFAAIVHWPIQERPA
PRPVMA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Homo sapiens, GI291621700, Length=421, Percent_Identity=22.0902612826603, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI42475555, Length=385, Percent_Identity=24.1558441558442, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43580; Mature: 43580

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMSQATRQTMPWLIIAAGSLIAVMTFGPRSAMGFFQLPMLADTGWDRSTFGLAMALQNL
CCCCHHHHHCCCEEEEECCCEEEEEECCCCCCCCHHCCCHHHCCCCCCHHHHHHHHHHHH
FWGLGQPFFGAIADKYGTGRVLVLSGILYAAGLVCMSFGTSPFWLHFGGGVLVGLGIAAG
HHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEHHHHHH
SFSVILSAFARHVTPQQRSLAFGIGTAAGSAGMFLFAPISQGLISAYGWSDSLVWLAAMM
HHHHHHHHHHHHCCCCHHHHEEEECCCCCCCCEEEEECHHHHHHHHCCCCCHHHHHHHHH
VLVPLLAWPMRGNSSSGSQSQAQFQQTVGEALKEALGHKSYLLLTTGFFVCGFQVAFITA
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHH
HFPAYLGDIGIEPRYAVIAMALIGFFNIIGSLAAGVIAQRYSKPYLLAYIYIARSVVVTA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
FLLLPQSPLSVILFASFMGILWLSTVPPTNALVAIMFGTRHLGMLGGVVFLTHQIGSFLG
HHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
VWLGGFLYDRFGTYDIVWWLGVGMGIFAAIVHWPIQERPAPRPVMA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MFMSQATRQTMPWLIIAAGSLIAVMTFGPRSAMGFFQLPMLADTGWDRSTFGLAMALQNL
CCCCHHHHHCCCEEEEECCCEEEEEECCCCCCCCHHCCCHHHCCCCCCHHHHHHHHHHHH
FWGLGQPFFGAIADKYGTGRVLVLSGILYAAGLVCMSFGTSPFWLHFGGGVLVGLGIAAG
HHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEHHHHHH
SFSVILSAFARHVTPQQRSLAFGIGTAAGSAGMFLFAPISQGLISAYGWSDSLVWLAAMM
HHHHHHHHHHHHCCCCHHHHEEEECCCCCCCCEEEEECHHHHHHHHCCCCCHHHHHHHHH
VLVPLLAWPMRGNSSSGSQSQAQFQQTVGEALKEALGHKSYLLLTTGFFVCGFQVAFITA
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHH
HFPAYLGDIGIEPRYAVIAMALIGFFNIIGSLAAGVIAQRYSKPYLLAYIYIARSVVVTA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
FLLLPQSPLSVILFASFMGILWLSTVPPTNALVAIMFGTRHLGMLGGVVFLTHQIGSFLG
HHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
VWLGGFLYDRFGTYDIVWWLGVGMGIFAAIVHWPIQERPAPRPVMA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]