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The map label for this gene is ycbX [H]

Identifier: 159184591

GI number: 159184591

Start: 1033792

End: 1034634

Strand: Reverse

Name: ycbX [H]

Synonym: Atu1042

Alternate gene names: 159184591

Gene position: 1034634-1033792 (Counterclockwise)

Preceding gene: 15888385

Following gene: 159184590

Centisome position: 36.41

GC content: 63.58

Gene sequence:

>843_bases
ATGCTTGTGACCGAACTCAACATCTATCCGCTGAAGAGCGCGCGCGGCATTGCGCTTAAGGAAAGCGCCGTTTCGGCCGA
AGGCCTGCCGGGAGACCGCCGCGCCATGCTGACCGACCCTTCCGGCCATTTCATCACCCAGCGCGAGTTGCCCGCCATCG
CCACCGTGCTGGCGCGGCATGAGGATGGCGGCATGGCGCTTTCGCGCGAGAGGAGCGGCGAGATTTTCGCAAGACCCTCC
GGGCAGCGTATGGATGTGGCGGTGTGGAAATCAATCGTCAGCGCCAATATCGCCGATGATGAAACCAACGACACACTCTC
GGCCTGGCTTGGGCGCGAGGTGAAGCTGGTATTCTTTGACGATGCCGCAAAACGCATCGCAAGCCTTGAATGGACGGGCA
ATGAGACACCCGTCACCTTTGCGGATGGCTACCAGATCCTCGTCACCACCACCGCCTCGCTTGCCGCACTCAACGACAAC
ATGCGCGGAAATGGCGAAGACGCCGTGGGCATGGAGCGGTTCCGGCCGAATATCGTGCTGGAGACGGAAGAGGCCTGGGC
GGAGGACCGCTGGGCTGCCATCGAGATCGGCGGCATTCGTTTCGATCTCGTCAAACCCTGCGCCCGCTGCATCATGACCA
CGCAGGACCAGATGACCGGCTCCCGCGACGTGCCCTCCCCCATGAAAGCCATGGGCCGCATTCGCATGTCCGGCGACCGG
CGCGTGCCGGGTCCACTGTTCGGCTGGAATGTGACGCCGCGCGGAGAAGGCAGGCTGTCCGTCGGCGATGTAGCAAGAGT
GGTCGAGGAACGGCCGGAGGGCTGGGCGATCAAGCGGCGGTAG

Upstream 100 bases:

>100_bases
GCTTCCGCACCGAAACCGGGCGGCAGATGGCCAAAGCCCGCCATGAGCGGCTGAAACAGGTGCTCGACCTGTTTCTCGAC
GAGATTTGAGGATATCGAAG

Downstream 100 bases:

>100_bases
GCAGGCGGCTTGGTTCTAACGGGACCCGCAGCAGGCTTCATGTTCTCATAGATGGCACACCCTCTCTCCCTCATTCCTGT
GCTCGTCACAGGAATCCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MLVTELNIYPLKSARGIALKESAVSAEGLPGDRRAMLTDPSGHFITQRELPAIATVLARHEDGGMALSRERSGEIFARPS
GQRMDVAVWKSIVSANIADDETNDTLSAWLGREVKLVFFDDAAKRIASLEWTGNETPVTFADGYQILVTTTASLAALNDN
MRGNGEDAVGMERFRPNIVLETEEAWAEDRWAAIEIGGIRFDLVKPCARCIMTTQDQMTGSRDVPSPMKAMGRIRMSGDR
RVPGPLFGWNVTPRGEGRLSVGDVARVVEERPEGWAIKRR

Sequences:

>Translated_280_residues
MLVTELNIYPLKSARGIALKESAVSAEGLPGDRRAMLTDPSGHFITQRELPAIATVLARHEDGGMALSRERSGEIFARPS
GQRMDVAVWKSIVSANIADDETNDTLSAWLGREVKLVFFDDAAKRIASLEWTGNETPVTFADGYQILVTTTASLAALNDN
MRGNGEDAVGMERFRPNIVLETEEAWAEDRWAAIEIGGIRFDLVKPCARCIMTTQDQMTGSRDVPSPMKAMGRIRMSGDR
RVPGPLFGWNVTPRGEGRLSVGDVARVVEERPEGWAIKRR
>Mature_280_residues
MLVTELNIYPLKSARGIALKESAVSAEGLPGDRRAMLTDPSGHFITQRELPAIATVLARHEDGGMALSRERSGEIFARPS
GQRMDVAVWKSIVSANIADDETNDTLSAWLGREVKLVFFDDAAKRIASLEWTGNETPVTFADGYQILVTTTASLAALNDN
MRGNGEDAVGMERFRPNIVLETEEAWAEDRWAAIEIGGIRFDLVKPCARCIMTTQDQMTGSRDVPSPMKAMGRIRMSGDR
RVPGPLFGWNVTPRGEGRLSVGDVARVVEERPEGWAIKRR

Specific function: Unknown

COG id: COG3217

COG function: function code R; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Homo sapiens, GI31542713, Length=284, Percent_Identity=29.9295774647887, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI224600454, Length=280, Percent_Identity=27.8571428571429, Blast_Score=95, Evalue=6e-20,
Organism=Homo sapiens, GI157388923, Length=246, Percent_Identity=26.4227642276423, Blast_Score=79, Evalue=4e-15,
Organism=Escherichia coli, GI1787179, Length=272, Percent_Identity=34.9264705882353, Blast_Score=148, Evalue=5e-37,
Organism=Caenorhabditis elegans, GI71990971, Length=294, Percent_Identity=26.8707482993197, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17561286, Length=303, Percent_Identity=26.0726072607261, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17540702, Length=286, Percent_Identity=25.1748251748252, Blast_Score=86, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR005302
- InterPro:   IPR005303
- InterPro:   IPR011037 [H]

Pfam domain/function: PF00111 Fer2; PF03473 MOSC; PF03476 MOSC_N [H]

EC number: NA

Molecular weight: Translated: 30814; Mature: 30814

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVTELNIYPLKSARGIALKESAVSAEGLPGDRRAMLTDPSGHFITQRELPAIATVLARH
CEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCEEECCCCHHHHHHHHHC
EDGGMALSRERSGEIFARPSGQRMDVAVWKSIVSANIADDETNDTLSAWLGREVKLVFFD
CCCCEEEECCCCCCEEECCCCCEEHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEEEC
DAAKRIASLEWTGNETPVTFADGYQILVTTTASLAALNDNMRGNGEDAVGMERFRPNIVL
CHHHHHEEEEECCCCCCEEEECCCEEEEEECHHHEECCCCCCCCCCCCCCHHHHCCCEEE
ETEEAWAEDRWAAIEIGGIRFDLVKPCARCIMTTQDQMTGSRDVPSPMKAMGRIRMSGDR
ECHHHCCCCCEEEEEECCEEEHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHCEEEECCCC
RVPGPLFGWNVTPRGEGRLSVGDVARVVEERPEGWAIKRR
CCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCEECCC
>Mature Secondary Structure
MLVTELNIYPLKSARGIALKESAVSAEGLPGDRRAMLTDPSGHFITQRELPAIATVLARH
CEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCEEECCCCHHHHHHHHHC
EDGGMALSRERSGEIFARPSGQRMDVAVWKSIVSANIADDETNDTLSAWLGREVKLVFFD
CCCCEEEECCCCCCEEECCCCCEEHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEEEEEC
DAAKRIASLEWTGNETPVTFADGYQILVTTTASLAALNDNMRGNGEDAVGMERFRPNIVL
CHHHHHEEEEECCCCCCEEEECCCEEEEEECHHHEECCCCCCCCCCCCCCHHHHCCCEEE
ETEEAWAEDRWAAIEIGGIRFDLVKPCARCIMTTQDQMTGSRDVPSPMKAMGRIRMSGDR
ECHHHCCCCCEEEEEECCEEEHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHCEEEECCCC
RVPGPLFGWNVTPRGEGRLSVGDVARVVEERPEGWAIKRR
CCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]