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The map label for this gene is yrkJ [H]

Identifier: 159184343

GI number: 159184343

Start: 484683

End: 485609

Strand: Reverse

Name: yrkJ [H]

Synonym: Atu0498

Alternate gene names: 159184343

Gene position: 485609-484683 (Counterclockwise)

Preceding gene: 159184344

Following gene: 159185427

Centisome position: 17.09

GC content: 60.73

Gene sequence:

>927_bases
GTGACTGTCTATCTGCCGATCGCAGAACTGTCGGTGAATATTTTCATCATTCTCGGCATGGGCGCGGCCGTCGGTTTTCT
GTCCGGCATGTTCGGCGTGGGCGGCGGCTTTCTGATCACCCCGCTGCTGATCTTCTACAATATTCCGCCCGTGGTCGCCG
TCGCGACCGGCGCAAACCAGGTGGTTGCCTCCTCCGTTTCAGGCTCGATCACGCATTTCCGGCGTGGAACGCTTGATATA
AAGCTCGGCACCGTGCTGCTCGTGGGCGGTCTCGTGGGCGCCACGGTCGGCGTGTGGATATTCTCCTTCCTACGCAGCAT
CGGCCAGCTCGATCTCATCGTTTCGCTGCTTTACGTCATCCTGCTCGGCACCGTCGGCACGCTGATGCTGAAGGAAAGCA
TTTCGGCGCTTCGCCGCGCCGCTCGCAATGAAACCGTGACGCTGCGTCGGCCGGGCCATCACAACTGGGTTCATCGCCTG
CCGCTGAAAATGCGGTTCAAGAAATCGAAAATCTATCTCAGCATCATTCCCATCGTTGCGCTTGGCTTCGGCATCGGCAT
CCTTACCTCGATCATGGGTGTGGGCGGCGGCTTCATCATGGTGCCGGCGATGATCTATCTGCTGCGCATCCCCACCAGCG
TGGTTGTCGGCACCTCGCTGTTCCAGATCATCTTCGTGACCGCCTATACGACCGTCGTTCAGGCCGCGACCAACTATTCC
GTCGATGTGGTGCTTGCCTTCATCCTGATGGTGGCTGGCGTCATCGGCGCGCAATATGGCGTGCGCGTGGGCCAGAAACT
GCGCGGTGAACAGCTGCGCGCGCTGCTTGCCCTTCTCGTCCTTGCCGTCGCGCTTCGCCTTGCCGTCTCGCTGGTGGTGC
GGCCGGAAGACCTGTTTTCGGTGGCCGTGGGGGGGCTCGGCTATTGA

Upstream 100 bases:

>100_bases
GGCATGCCCGGTCTTTTCAGACAGAAAGTGTAAATCGCGGCGCGGCCCCCTCACCCGGACAGGCCCTGTCGCCCGGAACC
ATTTGCCCGAGGTCCGAGCC

Downstream 100 bases:

>100_bases
CCTTCCGCCCGCTGCTCGCCGCTATTCTTCTGTTGCCCTTCCTTGCCTTTGGCGAAACGGCCTCGGCGCAGACGCCGCCG
CTTGCCCTGCCGCCCGGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MTVYLPIAELSVNIFIILGMGAAVGFLSGMFGVGGGFLITPLLIFYNIPPVVAVATGANQVVASSVSGSITHFRRGTLDI
KLGTVLLVGGLVGATVGVWIFSFLRSIGQLDLIVSLLYVILLGTVGTLMLKESISALRRAARNETVTLRRPGHHNWVHRL
PLKMRFKKSKIYLSIIPIVALGFGIGILTSIMGVGGGFIMVPAMIYLLRIPTSVVVGTSLFQIIFVTAYTTVVQAATNYS
VDVVLAFILMVAGVIGAQYGVRVGQKLRGEQLRALLALLVLAVALRLAVSLVVRPEDLFSVAVGGLGY

Sequences:

>Translated_308_residues
MTVYLPIAELSVNIFIILGMGAAVGFLSGMFGVGGGFLITPLLIFYNIPPVVAVATGANQVVASSVSGSITHFRRGTLDI
KLGTVLLVGGLVGATVGVWIFSFLRSIGQLDLIVSLLYVILLGTVGTLMLKESISALRRAARNETVTLRRPGHHNWVHRL
PLKMRFKKSKIYLSIIPIVALGFGIGILTSIMGVGGGFIMVPAMIYLLRIPTSVVVGTSLFQIIFVTAYTTVVQAATNYS
VDVVLAFILMVAGVIGAQYGVRVGQKLRGEQLRALLALLVLAVALRLAVSLVVRPEDLFSVAVGGLGY
>Mature_307_residues
TVYLPIAELSVNIFIILGMGAAVGFLSGMFGVGGGFLITPLLIFYNIPPVVAVATGANQVVASSVSGSITHFRRGTLDIK
LGTVLLVGGLVGATVGVWIFSFLRSIGQLDLIVSLLYVILLGTVGTLMLKESISALRRAARNETVTLRRPGHHNWVHRLP
LKMRFKKSKIYLSIIPIVALGFGIGILTSIMGVGGGFIMVPAMIYLLRIPTSVVVGTSLFQIIFVTAYTTVVQAATNYSV
DVVLAFILMVAGVIGAQYGVRVGQKLRGEQLRALLALLVLAVALRLAVSLVVRPEDLFSVAVGGLGY

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 32680; Mature: 32549

Theoretical pI: Translated: 11.03; Mature: 11.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVYLPIAELSVNIFIILGMGAAVGFLSGMFGVGGGFLITPLLIFYNIPPVVAVATGANQ
CEEEEEHHHHCEEEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCCHH
VVASSVSGSITHFRRGTLDIKLGTVLLVGGLVGATVGVWIFSFLRSIGQLDLIVSLLYVI
HHHHHCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGTVGTLMLKESISALRRAARNETVTLRRPGHHNWVHRLPLKMRFKKSKIYLSIIPIVA
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCHHEEEHHHHHHHHHHHHHH
LGFGIGILTSIMGVGGGFIMVPAMIYLLRIPTSVVVGTSLFQIIFVTAYTTVVQAATNYS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VDVVLAFILMVAGVIGAQYGVRVGQKLRGEQLRALLALLVLAVALRLAVSLVVRPEDLFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VAVGGLGY
HHHCCCCC
>Mature Secondary Structure 
TVYLPIAELSVNIFIILGMGAAVGFLSGMFGVGGGFLITPLLIFYNIPPVVAVATGANQ
EEEEEHHHHCEEEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCCHH
VVASSVSGSITHFRRGTLDIKLGTVLLVGGLVGATVGVWIFSFLRSIGQLDLIVSLLYVI
HHHHHCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGTVGTLMLKESISALRRAARNETVTLRRPGHHNWVHRLPLKMRFKKSKIYLSIIPIVA
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCHHEEEHHHHHHHHHHHHHH
LGFGIGILTSIMGVGGGFIMVPAMIYLLRIPTSVVVGTSLFQIIFVTAYTTVVQAATNYS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VDVVLAFILMVAGVIGAQYGVRVGQKLRGEQLRALLALLVLAVALRLAVSLVVRPEDLFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VAVGGLGY
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]