Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185427
Identifier: 159185427
GI number: 159185427
Start: 483859
End: 484650
Strand: Reverse
Name: 159185427
Synonym: Atu8130
Alternate gene names: NA
Gene position: 484650-483859 (Counterclockwise)
Preceding gene: 159184343
Following gene: 159184342
Centisome position: 17.06
GC content: 62.37
Gene sequence:
>792_bases TTGCCCTTCCTTGCCTTTGGCGAAACGGCCTCGGCGCAGACGCCGCCGCTTGCCCTGCCGCCCGGGCCGCAACAGCGGCC GCTGCAGGAAAATATCGAAATCGGTGCATCGACGACCGAAATACCCATCGCATCCGATTTTCGCGGTGCGGACTTCACCC TCTTCGGCGCGCTCAACAATACCGACCAGCTGCTGCTGGCCATCGGGCAGTATGATATCGTCGTGACGCTGGAAGGGCCG AGCGACTATATGACCGTGCGCAAGAAGCAGCGTGTGGCAGGCATCTGGATCAATACCAGTGCCATTACCTTCACGCCGCT GCCGGAATCCTACTCCATGGCCAGCACGCGCAATATCAACGACGTCGCCTCGCCCGGAACGTTGCGCGCCATGGGGCTCG GCGTCGACCATCTGTCGCTCAAAAGTGCCGTTTTCTCCGGCGTGCCCGACAATGTCTTCGATTTCCAGGAGGCCTATCGT CGGCTCAAGCTTTCGAGCGGGATCTATCGCAACGACACGACCGGGGTGCGGCTGGAACGTACCGGCCTGTTCTGGGCGAC GCTGCGCCTGCCTGCCAACGTGCCGAACGGGGTGCACACCGCCCGCGCCTATCTCTTCAAGAGCGGCAAATTCATCGCCC AGCGCGAATTGAAGCTGCGTGTCGTCAAGACCGGCATGGAACAGGCGATCACCGATGCGGCGCATCAGACGCCGCTTGCC TATGGCGCACTCTGCGTTCTCCTGGCGGTCGTGACGGGCTGGGGCGCCAGCATCATCTTCCGCAAGGACTGA
Upstream 100 bases:
>100_bases TTGCCGTCTCGCTGGTGGTGCGGCCGGAAGACCTGTTTTCGGTGGCCGTGGGGGGGCTCGGCTATTGACCTTCCGCCCGC TGCTCGCCGCTATTCTTCTG
Downstream 100 bases:
>100_bases TCGGTTCCTCTCGCAAAATCGGGCGCACGCTGCCCTTTCCGCCAAAGATAGCATTCGCTTCCGCCATCGGTTTGCGGTAA AATTCAAGGCGTTACAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MPFLAFGETASAQTPPLALPPGPQQRPLQENIEIGASTTEIPIASDFRGADFTLFGALNNTDQLLLAIGQYDIVVTLEGP SDYMTVRKKQRVAGIWINTSAITFTPLPESYSMASTRNINDVASPGTLRAMGLGVDHLSLKSAVFSGVPDNVFDFQEAYR RLKLSSGIYRNDTTGVRLERTGLFWATLRLPANVPNGVHTARAYLFKSGKFIAQRELKLRVVKTGMEQAITDAAHQTPLA YGALCVLLAVVTGWGASIIFRKD
Sequences:
>Translated_263_residues MPFLAFGETASAQTPPLALPPGPQQRPLQENIEIGASTTEIPIASDFRGADFTLFGALNNTDQLLLAIGQYDIVVTLEGP SDYMTVRKKQRVAGIWINTSAITFTPLPESYSMASTRNINDVASPGTLRAMGLGVDHLSLKSAVFSGVPDNVFDFQEAYR RLKLSSGIYRNDTTGVRLERTGLFWATLRLPANVPNGVHTARAYLFKSGKFIAQRELKLRVVKTGMEQAITDAAHQTPLA YGALCVLLAVVTGWGASIIFRKD >Mature_262_residues PFLAFGETASAQTPPLALPPGPQQRPLQENIEIGASTTEIPIASDFRGADFTLFGALNNTDQLLLAIGQYDIVVTLEGPS DYMTVRKKQRVAGIWINTSAITFTPLPESYSMASTRNINDVASPGTLRAMGLGVDHLSLKSAVFSGVPDNVFDFQEAYRR LKLSSGIYRNDTTGVRLERTGLFWATLRLPANVPNGVHTARAYLFKSGKFIAQRELKLRVVKTGMEQAITDAAHQTPLAY GALCVLLAVVTGWGASIIFRKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28589; Mature: 28458
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFLAFGETASAQTPPLALPPGPQQRPLQENIEIGASTTEIPIASDFRGADFTLFGALNN CCEEECCCCCCCCCCCCCCCCCCCCCCCHHCCEECCCCCCCCCCCCCCCCCEEEEEECCC TDQLLLAIGQYDIVVTLEGPSDYMTVRKKQRVAGIWINTSAITFTPLPESYSMASTRNIN CCEEEEEECCEEEEEEEECCCHHHHHHHHCCEEEEEEECCEEEEEECCCCCCCCCCCCCC DVASPGTLRAMGLGVDHLSLKSAVFSGVPDNVFDFQEAYRRLKLSSGIYRNDTTGVRLER CCCCCCCEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEECCCCCEEEEE TGLFWATLRLPANVPNGVHTARAYLFKSGKFIAQRELKLRVVKTGMEQAITDAAHQTPLA CCEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEHHEEEEEEHHHHHHHHHHHHHCCCHH YGALCVLLAVVTGWGASIIFRKD HHHHHHHHHHHHCCCCEEEEECC >Mature Secondary Structure PFLAFGETASAQTPPLALPPGPQQRPLQENIEIGASTTEIPIASDFRGADFTLFGALNN CEEECCCCCCCCCCCCCCCCCCCCCCCHHCCEECCCCCCCCCCCCCCCCCEEEEEECCC TDQLLLAIGQYDIVVTLEGPSDYMTVRKKQRVAGIWINTSAITFTPLPESYSMASTRNIN CCEEEEEECCEEEEEEEECCCHHHHHHHHCCEEEEEEECCEEEEEECCCCCCCCCCCCCC DVASPGTLRAMGLGVDHLSLKSAVFSGVPDNVFDFQEAYRRLKLSSGIYRNDTTGVRLER CCCCCCCEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEECCCCCEEEEE TGLFWATLRLPANVPNGVHTARAYLFKSGKFIAQRELKLRVVKTGMEQAITDAAHQTPLA CCEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEHHEEEEEEHHHHHHHHHHHHHCCCHH YGALCVLLAVVTGWGASIIFRKD HHHHHHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA