Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184342
Identifier: 159184342
GI number: 159184342
Start: 483264
End: 483701
Strand: Reverse
Name: 159184342
Synonym: Atu0496
Alternate gene names: NA
Gene position: 483701-483264 (Counterclockwise)
Preceding gene: 159185427
Following gene: 159184340
Centisome position: 17.02
GC content: 60.96
Gene sequence:
>438_bases ATGTTCAAGCACATTCTCATTCCCACCGATGGCTCGCCGCTGGCGCAGATCGCAATCGACCAAGGGTTCGCTCTCGCCAG AGAGGCAGGCGCAAAGGTGACCGTCGTGACGGTATCGGAACCCTTTCATGTAATTGCGAGCGACGTCGAAGACATTGCCG CCATTGCCGAAGAAGAATTCCACCGCTGCGAAGAGGCGGAGCATCTGCTGCGCGATACGCAGGCGCATGCCGCCGCCATG GGGCTGGATTGCGAGGCCCTGCTGGCAAGGGCGGGACGGCCGGATGAGGCGATCATCGAAATCGCCGACAGGACCGGCTG CGACCTCATTGCCATGGCCTCGCATCGGCGCAGGAGCTTTATCGAGATGCTGCTCGGCAGCGTCACGGCAAAGGTGCTGA AGAACTCGAAGATACCGGTGCTGGTCTACCGCCAATAG
Upstream 100 bases:
>100_bases CTTCCGCCATCGGTTTGCGGTAAAATTCAAGGCGTTACAACCGCGCGCGCCGATCATGGCAATGAGCGCGGTTGTGACCG GGATGAAAAGGAGAAATGTC
Downstream 100 bases:
>100_bases GCGGCGGCTGGACGACATACGCTCAGCCGAGCAGATTTGAAAACCGCACCGAATAGATGCGATCCCTCCCCATCAGATGC GCAACGAGTGCCGTGTGATC
Product: hypothetical protein
Products: NA
Alternate protein names: USP MJ0577 [H]
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MFKHILIPTDGSPLAQIAIDQGFALAREAGAKVTVVTVSEPFHVIASDVEDIAAIAEEEFHRCEEAEHLLRDTQAHAAAM GLDCEALLARAGRPDEAIIEIADRTGCDLIAMASHRRRSFIEMLLGSVTAKVLKNSKIPVLVYRQ
Sequences:
>Translated_145_residues MFKHILIPTDGSPLAQIAIDQGFALAREAGAKVTVVTVSEPFHVIASDVEDIAAIAEEEFHRCEEAEHLLRDTQAHAAAM GLDCEALLARAGRPDEAIIEIADRTGCDLIAMASHRRRSFIEMLLGSVTAKVLKNSKIPVLVYRQ >Mature_145_residues MFKHILIPTDGSPLAQIAIDQGFALAREAGAKVTVVTVSEPFHVIASDVEDIAAIAEEEFHRCEEAEHLLRDTQAHAAAM GLDCEALLARAGRPDEAIIEIADRTGCDLIAMASHRRRSFIEMLLGSVTAKVLKNSKIPVLVYRQ
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 15787; Mature: 15787
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKHILIPTDGSPLAQIAIDQGFALAREAGAKVTVVTVSEPFHVIASDVEDIAAIAEEEF CCCEEEEECCCCCHHHHHHHCCHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH HRCEEAEHLLRDTQAHAAAMGLDCEALLARAGRPDEAIIEIADRTGCDLIAMASHRRRSF HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHEEECCCCCCCEEHHHHHHHHHH IEMLLGSVTAKVLKNSKIPVLVYRQ HHHHHHHHHHHHHCCCCCCEEEEEC >Mature Secondary Structure MFKHILIPTDGSPLAQIAIDQGFALAREAGAKVTVVTVSEPFHVIASDVEDIAAIAEEEF CCCEEEEECCCCCHHHHHHHCCHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH HRCEEAEHLLRDTQAHAAAMGLDCEALLARAGRPDEAIIEIADRTGCDLIAMASHRRRSF HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHEEECCCCCCCEEHHHHHHHHHH IEMLLGSVTAKVLKNSKIPVLVYRQ HHHHHHHHHHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087; 9860944 [H]