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The map label for this gene is yffB [H]

Identifier: 159184340

GI number: 159184340

Start: 479337

End: 479840

Strand: Reverse

Name: yffB [H]

Synonym: Atu0493

Alternate gene names: 159184340

Gene position: 479840-479337 (Counterclockwise)

Preceding gene: 159184342

Following gene: 159184339

Centisome position: 16.89

GC content: 61.71

Gene sequence:

>504_bases
ATGAAACTCGGAGACGGCGTCGAACAGGCCATTCACAGCGTGAGCATGCTGGCGGGACTTTCCGAAGGCGGCGTGCTTTC
GGCGGCGGCGCTCGCGGAATTCCACGGCGTTTCCACGAGCTATCTGCTGAAGCACCTGCAGTCGCTATCCAACGCCGGCA
TCGTCACCACCGTGCCGGGACCGAAGGGCGGTTATCGTCTGGCCCGGACAACCGACAAGATTACCCTGCTTGATATTGTT
CTGGCCGTGGAGGGACCACAGCCTGCCTTTCGCTGCGCAGAAATTCGCCAGCGCGGGCCGAACCCCTTGCCGGGACGTTA
TTTCACCAAGCCCTGCGGCATCAACGCCGCGATGCTGAAGGCGGAAAAGGTCTACCGGGCGGAACTCGCTAAAACCAGCA
TTGCCGACATTCTGGGTGATCTTGCCGCCAATGACGATGGTGGAATTGCCGCGCGCGGCTGCGCCTTCCTCGACATGAAC
GAGCGCAAGACGACGACGCGCTGA

Upstream 100 bases:

>100_bases
AAGCTGCAAAAAAGAAGAGCGCAACGCGTCGGCTTGACAGGAAAACATAATCATGGATAAATAATATCCACGATAACAAG
ACAACAATGCGAGAAGACCG

Downstream 100 bases:

>100_bases
ACTCTAAACAGGACCCGAATAACCACCAATCACGTTCCCGGACAGCCTTACCGCTTTCCGGACCGATGACGCATGACTTC
AACCTATCCCAACCAATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MKLGDGVEQAIHSVSMLAGLSEGGVLSAAALAEFHGVSTSYLLKHLQSLSNAGIVTTVPGPKGGYRLARTTDKITLLDIV
LAVEGPQPAFRCAEIRQRGPNPLPGRYFTKPCGINAAMLKAEKVYRAELAKTSIADILGDLAANDDGGIAARGCAFLDMN
ERKTTTR

Sequences:

>Translated_167_residues
MKLGDGVEQAIHSVSMLAGLSEGGVLSAAALAEFHGVSTSYLLKHLQSLSNAGIVTTVPGPKGGYRLARTTDKITLLDIV
LAVEGPQPAFRCAEIRQRGPNPLPGRYFTKPCGINAAMLKAEKVYRAELAKTSIADILGDLAANDDGGIAARGCAFLDMN
ERKTTTR
>Mature_167_residues
MKLGDGVEQAIHSVSMLAGLSEGGVLSAAALAEFHGVSTSYLLKHLQSLSNAGIVTTVPGPKGGYRLARTTDKITLLDIV
LAVEGPQPAFRCAEIRQRGPNPLPGRYFTKPCGINAAMLKAEKVYRAELAKTSIADILGDLAANDDGGIAARGCAFLDMN
ERKTTTR

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 17581; Mature: 17581

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGDGVEQAIHSVSMLAGLSEGGVLSAAALAEFHGVSTSYLLKHLQSLSNAGIVTTVPG
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCC
PKGGYRLARTTDKITLLDIVLAVEGPQPAFRCAEIRQRGPNPLPGRYFTKPCGINAAMLK
CCCCEEEECCCCCCEEEHEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
AEKVYRAELAKTSIADILGDLAANDDGGIAARGCAFLDMNERKTTTR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEECCCCCCCCC
>Mature Secondary Structure
MKLGDGVEQAIHSVSMLAGLSEGGVLSAAALAEFHGVSTSYLLKHLQSLSNAGIVTTVPG
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCC
PKGGYRLARTTDKITLLDIVLAVEGPQPAFRCAEIRQRGPNPLPGRYFTKPCGINAAMLK
CCCCEEEECCCCCCEEEHEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
AEKVYRAELAKTSIADILGDLAANDDGGIAARGCAFLDMNERKTTTR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7773380; 11337471 [H]