Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184338
Identifier: 159184338
GI number: 159184338
Start: 478100
End: 478741
Strand: Direct
Name: 159184338
Synonym: Atu0491
Alternate gene names: NA
Gene position: 478100-478741 (Clockwise)
Preceding gene: 159184337
Following gene: 159184341
Centisome position: 16.83
GC content: 59.81
Gene sequence:
>642_bases ATGGACGATACCAGTGCGCGCAGGCGATTGAATCTTTGGACCTCCGCGCCCGATCGTCACTCGCTGCTGGAAGATGCACA GGCTATTCTGGCGGGCAGCATGCTGATTTCACTCGGTGTCACGCTGTTTTCCGCCGCAGGCCTTCTCACCGGCGGTGTGG TGGGTCTTGCGTTTCTGGCGCATTACGCCAGTGGGTTCAGCTTCGGTGCGGTCTTTTTTCTTGCCAACCTGCCGTTTTAT TATCTGGCCTTCCGCCGTCTCGGCCTCGCCTTCACGGTGAAGACCTTCTGCGCCATCGCCACGACGGCGCTGCTGTCGGA ATATATGCCGGGCTTTTTCGCTTTTGAGAGCATCAACCCGATTGCCGCTGCACTCTTCGGGGGACTGACGGTCGCCGCCG GCATGCTGGCGCTGTTTCGCCACCGCACCAGCCTCGGCGGTTTCGGCATATTGGCGCTCTATCTTCAGGATCGTTTCGGC TGGCGCGCCGGCCTCGTCCAGCTCGCTTTTGATGGCATGGTGCTCGGCTGCTCCTTCTTCGTCGCCACACCTTTTGTCAT CCTCTGCTCCATTCTCGGCGCGCTGGTCATGAACCTCACGCTTGCCGTCAATCACAGAAACGACCGCTACATCGCCATGT AG
Upstream 100 bases:
>100_bases TACATCGTCGTGCGTTAAGCCTGACCGCTTGAAATTTGTCAGGCTTGGGCGCAATAGCTGGGCAAGGTCGGGCCAGATCG GGCAAGTCAGGGGAAGATGC
Downstream 100 bases:
>100_bases CGGTCGGCCGTTGCGGTCAGGGTGGTTCAGGCTGCCTTTGCGGCGGCTTCGACCGGATGCTGTGAGCGGAAGCCGACGGC GATGCGGTTCCAGGTGTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MDDTSARRRLNLWTSAPDRHSLLEDAQAILAGSMLISLGVTLFSAAGLLTGGVVGLAFLAHYASGFSFGAVFFLANLPFY YLAFRRLGLAFTVKTFCAIATTALLSEYMPGFFAFESINPIAAALFGGLTVAAGMLALFRHRTSLGGFGILALYLQDRFG WRAGLVQLAFDGMVLGCSFFVATPFVILCSILGALVMNLTLAVNHRNDRYIAM
Sequences:
>Translated_213_residues MDDTSARRRLNLWTSAPDRHSLLEDAQAILAGSMLISLGVTLFSAAGLLTGGVVGLAFLAHYASGFSFGAVFFLANLPFY YLAFRRLGLAFTVKTFCAIATTALLSEYMPGFFAFESINPIAAALFGGLTVAAGMLALFRHRTSLGGFGILALYLQDRFG WRAGLVQLAFDGMVLGCSFFVATPFVILCSILGALVMNLTLAVNHRNDRYIAM >Mature_213_residues MDDTSARRRLNLWTSAPDRHSLLEDAQAILAGSMLISLGVTLFSAAGLLTGGVVGLAFLAHYASGFSFGAVFFLANLPFY YLAFRRLGLAFTVKTFCAIATTALLSEYMPGFFAFESINPIAAALFGGLTVAAGMLALFRHRTSLGGFGILALYLQDRFG WRAGLVQLAFDGMVLGCSFFVATPFVILCSILGALVMNLTLAVNHRNDRYIAM
Specific function: Unknown
COG id: COG1284
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22902; Mature: 22902
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDTSARRRLNLWTSAPDRHSLLEDAQAILAGSMLISLGVTLFSAAGLLTGGVVGLAFLA CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HYASGFSFGAVFFLANLPFYYLAFRRLGLAFTVKTFCAIATTALLSEYMPGFFAFESINP HHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCH IAAALFGGLTVAAGMLALFRHRTSLGGFGILALYLQDRFGWRAGLVQLAFDGMVLGCSFF HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHH VATPFVILCSILGALVMNLTLAVNHRNDRYIAM HHHHHHHHHHHHHHHHHHHHHEEECCCCCEECC >Mature Secondary Structure MDDTSARRRLNLWTSAPDRHSLLEDAQAILAGSMLISLGVTLFSAAGLLTGGVVGLAFLA CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HYASGFSFGAVFFLANLPFYYLAFRRLGLAFTVKTFCAIATTALLSEYMPGFFAFESINP HHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCH IAAALFGGLTVAAGMLALFRHRTSLGGFGILALYLQDRFGWRAGLVQLAFDGMVLGCSFF HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHH VATPFVILCSILGALVMNLTLAVNHRNDRYIAM HHHHHHHHHHHHHHHHHHHHHEEECCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA