Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184242
Identifier: 159184242
GI number: 159184242
Start: 272422
End: 272817
Strand: Direct
Name: 159184242
Synonym: Atu0277
Alternate gene names: NA
Gene position: 272422-272817 (Clockwise)
Preceding gene: 15887623
Following gene: 15887628
Centisome position: 9.59
GC content: 55.56
Gene sequence:
>396_bases ATGATGCCTGAGCCATGCAAAATCGAAGTGGCTGATATCCGAACGAGCGCGAGCAAAGCTGCATGGCTTCCCTGCTACAT CATGAGTTGTAGAACGCGGTGGAAATCCCCATTATTTAGGCATCAAAGATGGAGAGAAAAATGCGTCAGGTTGCAAAGAC ATCGCGTAACTTCTTCGGTGAAACTTTCGCCGTTCTCGGTGCAGCGCTCTCGGTTTCGGCCGCTGTTCGCGCACATCGCA AGCCCGCTCGCGCCGATCTCGAAGCTCTCGGTATCGACGGCAAGGCTTTCGACAAGGTCCAGCTCTAAGCTGGTTATCGT TTGTAGCGAGGCGACTTCGCCTCGCTTGCGCCTGGCACCGGAATCCACGTCGGTTTTCCGCAGGCGCCTCGGATGA
Upstream 100 bases:
>100_bases CCGTCATGCTACCGCCTCTTCGTCTTTAAGCTTTTCGGCATAACAAAATATCCATCTTATTCAAGCCGCCGCCTGAGGTG CGTTGCGCCATTTTCGAAGC
Downstream 100 bases:
>100_bases TTTGAACTGCGCCTTTGTTCGTATAGTTGCCCAGCAGCGGAGGCGGATAATTTCGGGCATGGGAGCCACGCTTTTTTGGC CCCACCTTATCGCGCCGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MMPEPCKIEVADIRTSASKAAWLPCYIMSCRTRWKSPLFRHQRWREKCVRLQRHRVTSSVKLSPFSVQRSRFRPLFAHIA SPLAPISKLSVSTARLSTRSSSKLVIVCSEATSPRLRLAPESTSVFRRRLG
Sequences:
>Translated_131_residues MMPEPCKIEVADIRTSASKAAWLPCYIMSCRTRWKSPLFRHQRWREKCVRLQRHRVTSSVKLSPFSVQRSRFRPLFAHIA SPLAPISKLSVSTARLSTRSSSKLVIVCSEATSPRLRLAPESTSVFRRRLG >Mature_131_residues MMPEPCKIEVADIRTSASKAAWLPCYIMSCRTRWKSPLFRHQRWREKCVRLQRHRVTSSVKLSPFSVQRSRFRPLFAHIA SPLAPISKLSVSTARLSTRSSSKLVIVCSEATSPRLRLAPESTSVFRRRLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15011; Mature: 15011
Theoretical pI: Translated: 12.19; Mature: 12.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPEPCKIEVADIRTSASKAAWLPCYIMSCRTRWKSPLFRHQRWREKCVRLQRHRVTSSV CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC KLSPFSVQRSRFRPLFAHIASPLAPISKLSVSTARLSTRSSSKLVIVCSEATSPRLRLAP CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEECC ESTSVFRRRLG CHHHHHHHHCC >Mature Secondary Structure MMPEPCKIEVADIRTSASKAAWLPCYIMSCRTRWKSPLFRHQRWREKCVRLQRHRVTSSV CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC KLSPFSVQRSRFRPLFAHIASPLAPISKLSVSTARLSTRSSSKLVIVCSEATSPRLRLAP CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEECC ESTSVFRRRLG CHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA