Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184140
Identifier: 159184140
GI number: 159184140
Start: 51048
End: 51533
Strand: Direct
Name: 159184140
Synonym: Atu0049
Alternate gene names: NA
Gene position: 51048-51533 (Clockwise)
Preceding gene: 15887405
Following gene: 159184144
Centisome position: 1.8
GC content: 54.73
Gene sequence:
>486_bases ATGACTATTCTTTCCTTTACCAATAATAATCCGTTAATCGACGGCCGCCAGTCGGACAAGGCGATGCTGGTACGTCGCGG CGTACAGGTGCTGTTGCATGAGATGCGCCATTCGGTTCTGCCGGAACTGCCGCTTGCGAGCGGACGCAGAGCCGATCTCA TTAGCCTGTCGGCCAAGGGTGAAATCTGGATCATCGAAATCAAATCCTCGATCGAGGATTTCCGCGTCGATCGTAAATGG CCGGATTATCGCCTGCATTGCGACCGGCTATTTTTCGCCACTCATCCGGAAGTTCCGACCGACATATTCCCTGAGGAATG TGGGCTGATCCTCTCGGATGGCTATGGAGCACACATGCTGCGAGATGCGCCGGAGCACAAATTGCCACCGGCGACCCGCA AATCGGTAATGCTGGATTTTTCAAGAACCGCTGCAACCCGGCTTATGTTGGCTGAATGGACGACCGGGCGCAGTTTCGGG GAATAG
Upstream 100 bases:
>100_bases TGGCAAGCCATTGTGCAGCCGCGAAACGGCAACGCCTTTAAAATTGCCGGTTGATTGCCTTTTTGCAACAATAGGCCAAA CGCTTCAGCAGCCTTTATCC
Downstream 100 bases:
>100_bases CGTTCGGTTCCAGCCCATTATCCGGACGTAAAACCATTGCGCACTTTTACTGGAAATGCTTCACTTCGGAGCGCGTTTCG CGAGAATGCGCTGCAGGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MTILSFTNNNPLIDGRQSDKAMLVRRGVQVLLHEMRHSVLPELPLASGRRADLISLSAKGEIWIIEIKSSIEDFRVDRKW PDYRLHCDRLFFATHPEVPTDIFPEECGLILSDGYGAHMLRDAPEHKLPPATRKSVMLDFSRTAATRLMLAEWTTGRSFG E
Sequences:
>Translated_161_residues MTILSFTNNNPLIDGRQSDKAMLVRRGVQVLLHEMRHSVLPELPLASGRRADLISLSAKGEIWIIEIKSSIEDFRVDRKW PDYRLHCDRLFFATHPEVPTDIFPEECGLILSDGYGAHMLRDAPEHKLPPATRKSVMLDFSRTAATRLMLAEWTTGRSFG E >Mature_160_residues TILSFTNNNPLIDGRQSDKAMLVRRGVQVLLHEMRHSVLPELPLASGRRADLISLSAKGEIWIIEIKSSIEDFRVDRKWP DYRLHCDRLFFATHPEVPTDIFPEECGLILSDGYGAHMLRDAPEHKLPPATRKSVMLDFSRTAATRLMLAEWTTGRSFGE
Specific function: Unknown
COG id: COG5321
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18343; Mature: 18212
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILSFTNNNPLIDGRQSDKAMLVRRGVQVLLHEMRHSVLPELPLASGRRADLISLSAKG CEEEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCC EIWIIEIKSSIEDFRVDRKWPDYRLHCDRLFFATHPEVPTDIFPEECGLILSDGYGAHML CEEEEEECCCHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCHHH RDAPEHKLPPATRKSVMLDFSRTAATRLMLAEWTTGRSFGE CCCCCCCCCCCCCCEEEEECHHHHHHHHHEEECCCCCCCCC >Mature Secondary Structure TILSFTNNNPLIDGRQSDKAMLVRRGVQVLLHEMRHSVLPELPLASGRRADLISLSAKG EEEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCC EIWIIEIKSSIEDFRVDRKWPDYRLHCDRLFFATHPEVPTDIFPEECGLILSDGYGAHML CEEEEEECCCHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCHHH RDAPEHKLPPATRKSVMLDFSRTAATRLMLAEWTTGRSFGE CCCCCCCCCCCCCCEEEEECHHHHHHHHHEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA