Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889921
Identifier: 15889921
GI number: 15889921
Start: 2649520
End: 2649978
Strand: Direct
Name: 15889921
Synonym: Atu2665
Alternate gene names: NA
Gene position: 2649520-2649978 (Clockwise)
Preceding gene: 159185312
Following gene: 159185315
Centisome position: 93.24
GC content: 58.39
Gene sequence:
>459_bases ATGGGCACAAAACGCGAAAAAGATTCACTGGCATTTCTGTTGAACAGCGGCGCCCGCCTGCTGAACAATGCTTTTGAGCG CCGAATTTCTGAAGCAGGACTGGGCCTGACCCCCGGCGAAGCACGCGCGTTGCTGACGGTTGCCGTCGTTGATGGCAGCA AGCAATCGGATATTGCCGCCCGTCTCGGCATCGAGCCCATGACGATCTGCGCCTATCTCGATAAGCTGCAATCCCTCGAC CTGATCGAGCGCCAGCAGGACCCGCAGGACAGGCGCTCCAAACGCATCGTACTGACAAAAAACTCCACAGACATGCTGGA AGCCGTGCGTCAGGAAATCGATGAACTGGTCCGTCACGCCACGCGTGGCTTGAACGAGGACGAAGTTGCGCTTTTCCGCA GCTTCCTGCAGACGCTTCGCGACAATCTCCAGCCTGAACAGCCGGGCCAGAGCTGCTGA
Upstream 100 bases:
>100_bases TGGAGCTGACGTATAGTTGAGCCGATTTTCGAGAATATGGGTCGCGTAGCATTGATTATCGCCCGGAATTTAGTAAGGCT GACTTACGAAAAGGCGAAGC
Downstream 100 bases:
>100_bases CCACAATGCCGCCAGAACCGATCATGTCGACAAAACGCACGGCCATTCTCGGCGCGTTGCTGACGGCGCTGGCGCCGATT TCCATGGCGATCTATACGCC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator Protein; Transcriptional Regulator
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MGTKREKDSLAFLLNSGARLLNNAFERRISEAGLGLTPGEARALLTVAVVDGSKQSDIAARLGIEPMTICAYLDKLQSLD LIERQQDPQDRRSKRIVLTKNSTDMLEAVRQEIDELVRHATRGLNEDEVALFRSFLQTLRDNLQPEQPGQSC
Sequences:
>Translated_152_residues MGTKREKDSLAFLLNSGARLLNNAFERRISEAGLGLTPGEARALLTVAVVDGSKQSDIAARLGIEPMTICAYLDKLQSLD LIERQQDPQDRRSKRIVLTKNSTDMLEAVRQEIDELVRHATRGLNEDEVALFRSFLQTLRDNLQPEQPGQSC >Mature_151_residues GTKREKDSLAFLLNSGARLLNNAFERRISEAGLGLTPGEARALLTVAVVDGSKQSDIAARLGIEPMTICAYLDKLQSLDL IERQQDPQDRRSKRIVLTKNSTDMLEAVRQEIDELVRHATRGLNEDEVALFRSFLQTLRDNLQPEQPGQSC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16979; Mature: 16847
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTKREKDSLAFLLNSGARLLNNAFERRISEAGLGLTPGEARALLTVAVVDGSKQSDIAA CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEEECCCCHHHHHH RLGIEPMTICAYLDKLQSLDLIERQQDPQDRRSKRIVLTKNSTDMLEAVRQEIDELVRHA HHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHH TRGLNEDEVALFRSFLQTLRDNLQPEQPGQSC HCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure GTKREKDSLAFLLNSGARLLNNAFERRISEAGLGLTPGEARALLTVAVVDGSKQSDIAA CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEEECCCCHHHHHH RLGIEPMTICAYLDKLQSLDLIERQQDPQDRRSKRIVLTKNSTDMLEAVRQEIDELVRHA HHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHH TRGLNEDEVALFRSFLQTLRDNLQPEQPGQSC HCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA