Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889690
Identifier: 15889690
GI number: 15889690
Start: 2393099
End: 2393623
Strand: Direct
Name: 15889690
Synonym: Atu2420
Alternate gene names: NA
Gene position: 2393099-2393623 (Clockwise)
Preceding gene: 15889689
Following gene: 159185211
Centisome position: 84.22
GC content: 60.19
Gene sequence:
>525_bases ATGAACCGTTTCTTCATCCTTTCCGGCTGCTCCGGCGGCGGCAAATCCACCCTGCTTGCTGAACTCGCCCGGCGCGGTTT CGCCACGGTGGAAGAGCCAGGCCGTCGCATCGTCATCGAGGAAACCCGCAATGGCGGCACCGCCCTGCCTTGGATCGACA TGCAGGCTTTCGCCCGCCGAGCCATCGCCATGGCGCTCGAAGACCGTCGGGTGACCCCAAAGGAAGGCCTCGTCTTCTTC GATCGCGGCCTGATCGACGCCGCCTCGGCACTTCACCATATAAGCGGCGATCGCTTCGTCAATACGTTACGCGATACGCA CCGCTATAATTCTCTGGTCTTCCTCACCCCACCCTGGCCGGAAATCTACCAAAGCGATGATGAGCGCAAACACGGTTTCG ATGCCGCCGTTGAGGAATATGAGCGCCTGGTTCGGGATTATGAGGGGCTCGGCTACGATATTGTCGTGCTTCCAAAATCA GCCGTTGCGGAGCGTGCGGACCTCATCCTGACACGCATCGGCTGA
Upstream 100 bases:
>100_bases CGGGCCACCTTCTCCCCCTCGGGGAGAAGAAACAAGCGGCCACCTATCCTCCCCAAAATCTTCTGTTCCACCCTCATCCT CGAAACAGGAACAAACACTC
Downstream 100 bases:
>100_bases CTTACACGCGACGATACCGGCCTCAGCGAGTTTCGAGCAATTGCGAAACCGTGACAAACTCGAACCCGCGTTGATGCAAC CCGTCGATGATCAACGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MNRFFILSGCSGGGKSTLLAELARRGFATVEEPGRRIVIEETRNGGTALPWIDMQAFARRAIAMALEDRRVTPKEGLVFF DRGLIDAASALHHISGDRFVNTLRDTHRYNSLVFLTPPWPEIYQSDDERKHGFDAAVEEYERLVRDYEGLGYDIVVLPKS AVAERADLILTRIG
Sequences:
>Translated_174_residues MNRFFILSGCSGGGKSTLLAELARRGFATVEEPGRRIVIEETRNGGTALPWIDMQAFARRAIAMALEDRRVTPKEGLVFF DRGLIDAASALHHISGDRFVNTLRDTHRYNSLVFLTPPWPEIYQSDDERKHGFDAAVEEYERLVRDYEGLGYDIVVLPKS AVAERADLILTRIG >Mature_174_residues MNRFFILSGCSGGGKSTLLAELARRGFATVEEPGRRIVIEETRNGGTALPWIDMQAFARRAIAMALEDRRVTPKEGLVFF DRGLIDAASALHHISGDRFVNTLRDTHRYNSLVFLTPPWPEIYQSDDERKHGFDAAVEEYERLVRDYEGLGYDIVVLPKS AVAERADLILTRIG
Specific function: Unknown
COG id: COG3911
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19567; Mature: 19567
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRFFILSGCSGGGKSTLLAELARRGFATVEEPGRRIVIEETRNGGTALPWIDMQAFARR CCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCEECHHHHHHH AIAMALEDRRVTPKEGLVFFDRGLIDAASALHHISGDRFVNTLRDTHRYNSLVFLTPPWP HHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECCCCH EIYQSDDERKHGFDAAVEEYERLVRDYEGLGYDIVVLPKSAVAERADLILTRIG HHHCCCCCHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHEEEEECC >Mature Secondary Structure MNRFFILSGCSGGGKSTLLAELARRGFATVEEPGRRIVIEETRNGGTALPWIDMQAFARR CCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCEECHHHHHHH AIAMALEDRRVTPKEGLVFFDRGLIDAASALHHISGDRFVNTLRDTHRYNSLVFLTPPWP HHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECCCCH EIYQSDDERKHGFDAAVEEYERLVRDYEGLGYDIVVLPKSAVAERADLILTRIG HHHCCCCCHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA