Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 15889349
Identifier: 15889349
GI number: 15889349
Start: 2026395
End: 2026820
Strand: Direct
Name: 15889349
Synonym: Atu2063
Alternate gene names: NA
Gene position: 2026395-2026820 (Clockwise)
Preceding gene: 159185034
Following gene: 159185035
Centisome position: 71.31
GC content: 62.44
Gene sequence:
>426_bases ATGATCGTCTGGATCGCCATGGCCTTTGCCGGCGGCGTGTTCGTGTCGCTAAGCCGGCAGATCAACGGCCGCCTCAGCCT GTCCAACTCACCGCTGATCGCTTCTTTCTGGAACCACATCGTCGGTTTCACGGTGTTGACCGTCATCGGCCTCATCGTCG GCGGCCTCATTCCGCCGGGTGCTGCCGACGCGCCCTGGCTTGCCTTTATCGGCGGCCCGATCGGCGTCGTTTTCATCGCT TCGGGAAGCTGGCTCATTCCTCGCATCGGCGCGGTCAATACCGCCCTTCTCGTCATCAGCGGCCAAATGGTATCGGGCGT CGTGCTTGATCTCTTCAGCGATCACCCGCCGAAAATCTGGGCAAGCGCGCTTGGCATCCTGCTCATCCTTGCCGGCATGG TGCTGACACAGCGACGCCGCCGCTAG
Upstream 100 bases:
>100_bases TCTTCGGCCTGCCAAAACGGCGACCGGATGTGCAGGACATGGTGGCGGTCTGCCTCATTCTCTGCGGCAGTGCACTGATC ATCCTTGTCGGGAGAGCGGC
Downstream 100 bases:
>100_bases GGCGTTCCGCTAAGATCAAAAGGCGATCAGGAATCGTTGCCGCGCGAGAACATGCCGAGCAGCGTCTTGCCGCCGCTCTT GCCGCCACTGCTCGCAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MIVWIAMAFAGGVFVSLSRQINGRLSLSNSPLIASFWNHIVGFTVLTVIGLIVGGLIPPGAADAPWLAFIGGPIGVVFIA SGSWLIPRIGAVNTALLVISGQMVSGVVLDLFSDHPPKIWASALGILLILAGMVLTQRRRR
Sequences:
>Translated_141_residues MIVWIAMAFAGGVFVSLSRQINGRLSLSNSPLIASFWNHIVGFTVLTVIGLIVGGLIPPGAADAPWLAFIGGPIGVVFIA SGSWLIPRIGAVNTALLVISGQMVSGVVLDLFSDHPPKIWASALGILLILAGMVLTQRRRR >Mature_141_residues MIVWIAMAFAGGVFVSLSRQINGRLSLSNSPLIASFWNHIVGFTVLTVIGLIVGGLIPPGAADAPWLAFIGGPIGVVFIA SGSWLIPRIGAVNTALLVISGQMVSGVVLDLFSDHPPKIWASALGILLILAGMVLTQRRRR
Specific function: Unknown
COG id: COG3238
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14825; Mature: 14825
Theoretical pI: Translated: 12.38; Mature: 12.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVWIAMAFAGGVFVSLSRQINGRLSLSNSPLIASFWNHIVGFTVLTVIGLIVGGLIPPG CEEEEEEHHHCHHHEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AADAPWLAFIGGPIGVVFIASGSWLIPRIGAVNTALLVISGQMVSGVVLDLFSDHPPKIW CCCCCCCEEECCCEEEEEEECCCEECCCCCCHHEEEEEEECHHHHHHHHHHHCCCCCHHH ASALGILLILAGMVLTQRRRR HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIVWIAMAFAGGVFVSLSRQINGRLSLSNSPLIASFWNHIVGFTVLTVIGLIVGGLIPPG CEEEEEEHHHCHHHEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AADAPWLAFIGGPIGVVFIASGSWLIPRIGAVNTALLVISGQMVSGVVLDLFSDHPPKIW CCCCCCCEEECCCEEEEEEECCCEECCCCCCHHEEEEEEECHHHHHHHHHHHCCCCCHHH ASALGILLILAGMVLTQRRRR HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA