Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is ygjT [C]
Identifier: 15889162
GI number: 15889162
Start: 1840759
End: 1841742
Strand: Direct
Name: ygjT [C]
Synonym: Atu1861
Alternate gene names: 15889162
Gene position: 1840759-1841742 (Clockwise)
Preceding gene: 159184948
Following gene: 159184957
Centisome position: 64.78
GC content: 57.01
Gene sequence:
>984_bases ATGGAGTTCCTCCTCAACGATTTTCTCGGTACCCCCACATGGATGTGGGCGGTCTTCATTTCTCTCGTCCTTGGTCTCTT GGCGCTCGATCTTGGCGTACTGCACAAGAATTCCAAGGAAATCGGCATTCGTGAGAGCCTGCTGATGTCAGGCTTCTACA TCGCCATTGGTTTGGCCTTCGGCGGCTGGATCTGGTACCAGTCCGGCCAGCAATCGGCGATGGAATATGTCACCGGCTTC GTGGTCGAAAAAAGCCTGGCGATGGACAATATCTTCATCATCGCGATGATCTTCTCCTATTTCGCCATTCCCCGCCAATA TCAGCACCGCGTGCTGCTCTGGGGTATCCTCGGCGTCATCGTCCTGCGCGGCATCATGATTGCCGGCGGTGCGGCCATCG TCGAAAACTTCCACTGGGTGCTTTATCTCTTTGCGGCCTTCCTCGTCTTCACCGGCCTCAAGATGCTGTTTTCGTCCGAC CATGACGAGAACGATATCGGCAACAACCGCATCCTGAAATTCCTGCGCAGCCGCCTGCCGGTGACGGAAAAGCCGCATGG CGAGAAATTCTTCGTCAAGGAAACCGACGCGACCACCGGCAAGCTGAAGACCTTCGTGACGCCGCTCTTCCTGGCGCTCA TCATGGTCGAAATCGCCGACCTGATCTTCGCGGTAGATTCGATCCCGGCGATCTTTGCGATCACCACCGATCCGTTTATC GTCTACACCTCGAACATCTTCGCGATCCTCGGCCTGCGCGCCCTCTACTTCGCACTCGCCGCCCTGATCCACCGCTTCGC TTATCTGAAATATGCGCTGGCTGCGGTTCTGGTCTTTGTCGGTTCGAAGATTTTCGTGGCAGACATGCTGGGCATCGCCA AGATCCCGCCGGCCGTCTCGCTCGGCGTCACCGTCGCCATCCTCGCCACCGGCATCATCGGTTCGCTAGTCGCGACGCGA AAGGAAGCAAAGGCTATCGAGTAA
Upstream 100 bases:
>100_bases CAACACGTGATGTCGAGTTTCTTTAGGTTGGGGCCCACGTATATTTTTGACACGCGTTCCCCATCCGCAAAGCCAACCTC GTCCGGCTAAAGGTTGACTG
Downstream 100 bases:
>100_bases GGCCTATAACGGTAAGCGGCAGGGAAACCTGCCGCAACCTCACTCCGCCGCCAGTTTCGCATCATCCTCAGCCGCATCCG CATCGCCGGGTGCGGTTTTT
Product: transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MEFLLNDFLGTPTWMWAVFISLVLGLLALDLGVLHKNSKEIGIRESLLMSGFYIAIGLAFGGWIWYQSGQQSAMEYVTGF VVEKSLAMDNIFIIAMIFSYFAIPRQYQHRVLLWGILGVIVLRGIMIAGGAAIVENFHWVLYLFAAFLVFTGLKMLFSSD HDENDIGNNRILKFLRSRLPVTEKPHGEKFFVKETDATTGKLKTFVTPLFLALIMVEIADLIFAVDSIPAIFAITTDPFI VYTSNIFAILGLRALYFALAALIHRFAYLKYALAAVLVFVGSKIFVADMLGIAKIPPAVSLGVTVAILATGIIGSLVATR KEAKAIE
Sequences:
>Translated_327_residues MEFLLNDFLGTPTWMWAVFISLVLGLLALDLGVLHKNSKEIGIRESLLMSGFYIAIGLAFGGWIWYQSGQQSAMEYVTGF VVEKSLAMDNIFIIAMIFSYFAIPRQYQHRVLLWGILGVIVLRGIMIAGGAAIVENFHWVLYLFAAFLVFTGLKMLFSSD HDENDIGNNRILKFLRSRLPVTEKPHGEKFFVKETDATTGKLKTFVTPLFLALIMVEIADLIFAVDSIPAIFAITTDPFI VYTSNIFAILGLRALYFALAALIHRFAYLKYALAAVLVFVGSKIFVADMLGIAKIPPAVSLGVTVAILATGIIGSLVATR KEAKAIE >Mature_327_residues MEFLLNDFLGTPTWMWAVFISLVLGLLALDLGVLHKNSKEIGIRESLLMSGFYIAIGLAFGGWIWYQSGQQSAMEYVTGF VVEKSLAMDNIFIIAMIFSYFAIPRQYQHRVLLWGILGVIVLRGIMIAGGAAIVENFHWVLYLFAAFLVFTGLKMLFSSD HDENDIGNNRILKFLRSRLPVTEKPHGEKFFVKETDATTGKLKTFVTPLFLALIMVEIADLIFAVDSIPAIFAITTDPFI VYTSNIFAILGLRALYFALAALIHRFAYLKYALAAVLVFVGSKIFVADMLGIAKIPPAVSLGVTVAILATGIIGSLVATR KEAKAIE
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI48994922, Length=326, Percent_Identity=44.478527607362, Blast_Score=248, Evalue=3e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022369 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 36133; Mature: 36133
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFLLNDFLGTPTWMWAVFISLVLGLLALDLGVLHKNSKEIGIRESLLMSGFYIAIGLAF CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH GGWIWYQSGQQSAMEYVTGFVVEKSLAMDNIFIIAMIFSYFAIPRQYQHRVLLWGILGVI HHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VLRGIMIAGGAAIVENFHWVLYLFAAFLVFTGLKMLFSSDHDENDIGNNRILKFLRSRLP HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC VTEKPHGEKFFVKETDATTGKLKTFVTPLFLALIMVEIADLIFAVDSIPAIFAITTDPFI CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEE VYTSNIFAILGLRALYFALAALIHRFAYLKYALAAVLVFVGSKIFVADMLGIAKIPPAVS EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHH LGVTVAILATGIIGSLVATRKEAKAIE HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEFLLNDFLGTPTWMWAVFISLVLGLLALDLGVLHKNSKEIGIRESLLMSGFYIAIGLAF CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH GGWIWYQSGQQSAMEYVTGFVVEKSLAMDNIFIIAMIFSYFAIPRQYQHRVLLWGILGVI HHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VLRGIMIAGGAAIVENFHWVLYLFAAFLVFTGLKMLFSSDHDENDIGNNRILKFLRSRLP HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC VTEKPHGEKFFVKETDATTGKLKTFVTPLFLALIMVEIADLIFAVDSIPAIFAITTDPFI CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEE VYTSNIFAILGLRALYFALAALIHRFAYLKYALAAVLVFVGSKIFVADMLGIAKIPPAVS EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHH LGVTVAILATGIIGSLVATRKEAKAIE HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]