Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is bcp [H]
Identifier: 15889133
GI number: 15889133
Start: 1813147
End: 1813614
Strand: Direct
Name: bcp [H]
Synonym: Atu1830
Alternate gene names: 15889133
Gene position: 1813147-1813614 (Clockwise)
Preceding gene: 159184939
Following gene: 159184940
Centisome position: 63.81
GC content: 56.62
Gene sequence:
>468_bases ATGACTGACCTGACGATTGGCAGCCCCGCCCCCGACTTCACCTTGCCCCGTAATGGTGAAGGGACGGTGACATTGTCGAA ACTGCAAGGCAAGGCCGTCATACTCTATTTCTACCCCAAGGACGACACATCCGGCTGCACGGTCGAAGCGATCGACTTCA GCGCGCTCGGCGGCGAATTCGAGGCCGCCAATGCCGTTGTCATCGGAATTTCACCCGACAGCGTCAAAAGCCACGACAAG TTTGCGGCAAAACATTCCCTTTCCGTCATGCTCGCTTCCGACGAGGAGAGGAAGGTTCTGGAGGCCTATGGCGTCTGGAA GGAAAAAAGCATGTATGGGAAAAAATACATGGGCGTCGAACGCACGACGGTTCTCATCGCCCCGGATGGCAAGATCGCCG AAATCTGGAACAAGGTGAAAGTCGCGGGTCACGCACAGGCCGTTCTCGAGGCCGCCAAAAAGCTCTGA
Upstream 100 bases:
>100_bases AGTAGCTTTTGTTTCGCCGCAACACTGGACGACGCGCGGTTTCGCTATATATCGAATGTGGCGACTTTCCCTCAACATCC CGGCGAAAGAAAGGTAGAAT
Downstream 100 bases:
>100_bases GGGGCCATCCAGCCGTGATGTTCCCCGCCAAAATCATATCCCTGCGCGGCGGCGCCACGGAAGCGATCGTCAGCGCCGAT CTCGACCGAAAGACCGAACT
Product: bacterioferritin comigratory protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein homolog; Thioredoxin reductase [H]
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MTDLTIGSPAPDFTLPRNGEGTVTLSKLQGKAVILYFYPKDDTSGCTVEAIDFSALGGEFEAANAVVIGISPDSVKSHDK FAAKHSLSVMLASDEERKVLEAYGVWKEKSMYGKKYMGVERTTVLIAPDGKIAEIWNKVKVAGHAQAVLEAAKKL
Sequences:
>Translated_155_residues MTDLTIGSPAPDFTLPRNGEGTVTLSKLQGKAVILYFYPKDDTSGCTVEAIDFSALGGEFEAANAVVIGISPDSVKSHDK FAAKHSLSVMLASDEERKVLEAYGVWKEKSMYGKKYMGVERTTVLIAPDGKIAEIWNKVKVAGHAQAVLEAAKKL >Mature_154_residues TDLTIGSPAPDFTLPRNGEGTVTLSKLQGKAVILYFYPKDDTSGCTVEAIDFSALGGEFEAANAVVIGISPDSVKSHDKF AAKHSLSVMLASDEERKVLEAYGVWKEKSMYGKKYMGVERTTVLIAPDGKIAEIWNKVKVAGHAQAVLEAAKKL
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=154, Percent_Identity=40.9090909090909, Blast_Score=120, Evalue=4e-29, Organism=Caenorhabditis elegans, GI193204376, Length=118, Percent_Identity=37.2881355932203, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI32565831, Length=118, Percent_Identity=37.2881355932203, Blast_Score=67, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6322180, Length=161, Percent_Identity=31.055900621118, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 16678; Mature: 16547
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLTIGSPAPDFTLPRNGEGTVTLSKLQGKAVILYFYPKDDTSGCTVEAIDFSALGGEF CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCEEEEEEHHHCCCCC EAANAVVIGISPDSVKSHDKFAAKHSLSVMLASDEERKVLEAYGVWKEKSMYGKKYMGVE CCCCEEEEEECCCCCCCCHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCC RTTVLIAPDGKIAEIWNKVKVAGHAQAVLEAAKKL CEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure TDLTIGSPAPDFTLPRNGEGTVTLSKLQGKAVILYFYPKDDTSGCTVEAIDFSALGGEF CCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCEEEEEEHHHCCCCC EAANAVVIGISPDSVKSHDKFAAKHSLSVMLASDEERKVLEAYGVWKEKSMYGKKYMGVE CCCCEEEEEECCCCCCCCHHHHHCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCC RTTVLIAPDGKIAEIWNKVKVAGHAQAVLEAAKKL CEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]