Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is kefB [H]
Identifier: 15888999
GI number: 15888999
Start: 1677558
End: 1679366
Strand: Reverse
Name: kefB [H]
Synonym: Atu1693
Alternate gene names: 15888999
Gene position: 1679366-1677558 (Counterclockwise)
Preceding gene: 15889000
Following gene: 15888998
Centisome position: 59.1
GC content: 62.96
Gene sequence:
>1809_bases GTGGCTGTAGAAGCGAACGGAAATGATCTGGCCCAGGTGGTCGTGCTTTTGGCGGCGGGCGTTATCGCCGCGCCGATCTT CAAGCGCATCGGCCTCGGCTCGGTGCTGGGTTATCTGGCCGCCGGCCTCGTGATCGGGCCTTATGGTCTCGGTTTCTTTT CCGATTCGCAGGCCATCCTGCATGTCGCCGAACTGGGCGTGGTGATGTTCCTGTTCATCATCGGCCTTGAAATGCAGCCC TCGCGATTGTGGTCGATGCGGCAGGATATTTTCGGGCTCGGCGCATTGCAGGTGCTGGTCTGCATGGGTGGCCTGACGCT GGTGGGTGTCAGCCTCGGTTTTCCCGTCATCATGTCCTTCGTTGCCGGTACCGGCTTTGTGCTGACCTCGACGGCGATCG TCATGCAGATGCTGCAGGAACGCAACAGCATGTCGAGCCTGAAAGGGCAGCGCATCATCGCCATCCTGCTGTTCGAGGAC CTCGCCATCGTGCCGCTCTTGGCGCTCGTCGCCTTTCTCGGTTCGGGTGGGGAGCATGTGACCGCCTCGGAGCGCTGGCT TTCGATCGGGATTGCGCTTGCCGCCGTCGGTGCGCTTATCCTCGCCGGCCGTTATCTGCTCAACCCGTTCTTCCGCCTGC TGGCGGCCTCCGGCGCGCGCGAGGTGATGACAGCCGCGGCGCTGCTGGTGGTGCTGGGGTCGGCGCTTTTGATGCAGGTC AGCGGTCTTTCCATGGCCATGGGGGCGTTTCTGGCCGGCGTGCTTTTGTCAGAATCATCCTTCCGCCATCAGCTGGAGGC GGATATCGAGCCGTTTCGCGGCATTCTGCTCGGCCTGTTCTTCCTCGGCGTCGGCATGGCTATCGACCTTGCCGTCATTG CCTCGAACTGGCAGCTCGTGGTCGTCAGCGTCGCCGGCTACATGCTGCTGAAAGCCTTCCTGATCTATGGCGTGGCGCGG GCGCTTGGCACTACGCGGCGTGAAAGCCTCGAGCGGGCGGTGCTGATGGCGCAGGGCGGCGAATTCGCCTTCGTACTTTA TTCAGCCGCCGTCAGCGCCGGCATTCTCGACCGGGAGGCCAACGCCATTCTGACGGCGACGATCATCATCTCCATGGTGC TGACGCCGCTGATGGTCATCCTGCATGACCGGCTGGTGCCGGCGGCGGTTCCCAATACCGACGATCTCGATGTGCCTGAG AATGTCGAGGGCAGCATTCTGCTGATCGGTTTCGGACGTTTCGGCCAGATCGTCAGCCAGCCGCTTCTGGCGCGCGGTTA TACGCTGTCGCTGATCGACAAGGATGCCGACTTCGTGCGCGACGCGGCGGAGTTCGGTTTCAAGGTCTATTATGGCGACG GATCGCGGGCGGAAATCCTGCACGCGGCGGGCGCCAGCACGGCACGAGCGGTGTTGATCTGCGTTGACGACAAGGACGCG GCCGTGCGGATCGCGGAAATCGTCAAGCATGAATTCCCGCTGGTTCCTGTTCTTGCCCGTGCCTATGATCGTGGCCACGC AATCGATCTGCTGAAGGCTGGCGTCGATTATCAGATTCGCGAGACGCTGGAATCGGCGCTGAATTTCAGCGAGGAAGTGC TGGGTGCCATGGGCGAGGAGCGGGAAGACGCCGCCCGCCTGGTGGAGGAATTCCGCGACCGCGACGAGGAGCGTTTCGCC ATGGAAGTCGTCGGCGGCATCTATGCCGGCCGTTCGCTGATCCGTGGCAATGCCCAGCCTGCCGATCTCGTCGCTGCGCG CACCGCGCGCGAGCGGGCGGAGCGGGAAAAGGCGGAAGCGGAAGAATAA
Upstream 100 bases:
>100_bases GCTCTGTCCCCGACGAAAATCGTTTTCGCTTTTCACGCCGATGCGCTAGGAAGTGAGGGAGGGAGCACCCTCGTCTTATT GATTTTCAGCGGGGTGGCGT
Downstream 100 bases:
>100_bases GGGATTGCGCCTTTCGGCGGCGCAGGGTGATTTCGAGGGATTGGAACTGACATGACGATCATTCGCACGGTTGAGGAACT GAAGGCCATTTATGACGGCA
Product: glutathione-regulated potassium-efflux system protein
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 602; Mature: 601
Protein sequence:
>602_residues MAVEANGNDLAQVVVLLAAGVIAAPIFKRIGLGSVLGYLAAGLVIGPYGLGFFSDSQAILHVAELGVVMFLFIIGLEMQP SRLWSMRQDIFGLGALQVLVCMGGLTLVGVSLGFPVIMSFVAGTGFVLTSTAIVMQMLQERNSMSSLKGQRIIAILLFED LAIVPLLALVAFLGSGGEHVTASERWLSIGIALAAVGALILAGRYLLNPFFRLLAASGAREVMTAAALLVVLGSALLMQV SGLSMAMGAFLAGVLLSESSFRHQLEADIEPFRGILLGLFFLGVGMAIDLAVIASNWQLVVVSVAGYMLLKAFLIYGVAR ALGTTRRESLERAVLMAQGGEFAFVLYSAAVSAGILDREANAILTATIIISMVLTPLMVILHDRLVPAAVPNTDDLDVPE NVEGSILLIGFGRFGQIVSQPLLARGYTLSLIDKDADFVRDAAEFGFKVYYGDGSRAEILHAAGASTARAVLICVDDKDA AVRIAEIVKHEFPLVPVLARAYDRGHAIDLLKAGVDYQIRETLESALNFSEEVLGAMGEEREDAARLVEEFRDRDEERFA MEVVGGIYAGRSLIRGNAQPADLVAARTARERAEREKAEAEE
Sequences:
>Translated_602_residues MAVEANGNDLAQVVVLLAAGVIAAPIFKRIGLGSVLGYLAAGLVIGPYGLGFFSDSQAILHVAELGVVMFLFIIGLEMQP SRLWSMRQDIFGLGALQVLVCMGGLTLVGVSLGFPVIMSFVAGTGFVLTSTAIVMQMLQERNSMSSLKGQRIIAILLFED LAIVPLLALVAFLGSGGEHVTASERWLSIGIALAAVGALILAGRYLLNPFFRLLAASGAREVMTAAALLVVLGSALLMQV SGLSMAMGAFLAGVLLSESSFRHQLEADIEPFRGILLGLFFLGVGMAIDLAVIASNWQLVVVSVAGYMLLKAFLIYGVAR ALGTTRRESLERAVLMAQGGEFAFVLYSAAVSAGILDREANAILTATIIISMVLTPLMVILHDRLVPAAVPNTDDLDVPE NVEGSILLIGFGRFGQIVSQPLLARGYTLSLIDKDADFVRDAAEFGFKVYYGDGSRAEILHAAGASTARAVLICVDDKDA AVRIAEIVKHEFPLVPVLARAYDRGHAIDLLKAGVDYQIRETLESALNFSEEVLGAMGEEREDAARLVEEFRDRDEERFA MEVVGGIYAGRSLIRGNAQPADLVAARTARERAEREKAEAEE >Mature_601_residues AVEANGNDLAQVVVLLAAGVIAAPIFKRIGLGSVLGYLAAGLVIGPYGLGFFSDSQAILHVAELGVVMFLFIIGLEMQPS RLWSMRQDIFGLGALQVLVCMGGLTLVGVSLGFPVIMSFVAGTGFVLTSTAIVMQMLQERNSMSSLKGQRIIAILLFEDL AIVPLLALVAFLGSGGEHVTASERWLSIGIALAAVGALILAGRYLLNPFFRLLAASGAREVMTAAALLVVLGSALLMQVS GLSMAMGAFLAGVLLSESSFRHQLEADIEPFRGILLGLFFLGVGMAIDLAVIASNWQLVVVSVAGYMLLKAFLIYGVARA LGTTRRESLERAVLMAQGGEFAFVLYSAAVSAGILDREANAILTATIIISMVLTPLMVILHDRLVPAAVPNTDDLDVPEN VEGSILLIGFGRFGQIVSQPLLARGYTLSLIDKDADFVRDAAEFGFKVYYGDGSRAEILHAAGASTARAVLICVDDKDAA VRIAEIVKHEFPLVPVLARAYDRGHAIDLLKAGVDYQIRETLESALNFSEEVLGAMGEEREDAARLVEEFRDRDEERFAM EVVGGIYAGRSLIRGNAQPADLVAARTARERAEREKAEAEE
Specific function: Transport system that facilitate potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=362, Percent_Identity=27.9005524861878, Blast_Score=91, Evalue=4e-18, Organism=Escherichia coli, GI1786232, Length=562, Percent_Identity=41.2811387900356, Blast_Score=422, Evalue=1e-119, Organism=Escherichia coli, GI1789749, Length=585, Percent_Identity=41.1965811965812, Blast_Score=413, Evalue=1e-116, Organism=Escherichia coli, GI1786685, Length=497, Percent_Identity=27.364185110664, Blast_Score=166, Evalue=3e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 64189; Mature: 64058
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVEANGNDLAQVVVLLAAGVIAAPIFKRIGLGSVLGYLAAGLVIGPYGLGFFSDSQAIL CEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCHHHH HVAELGVVMFLFIIGLEMQPSRLWSMRQDIFGLGALQVLVCMGGLTLVGVSLGFPVIMSF HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VAGTGFVLTSTAIVMQMLQERNSMSSLKGQRIIAILLFEDLAIVPLLALVAFLGSGGEHV HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEE TASERWLSIGIALAAVGALILAGRYLLNPFFRLLAASGAREVMTAAALLVVLGSALLMQV EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH SGLSMAMGAFLAGVLLSESSFRHQLEADIEPFRGILLGLFFLGVGMAIDLAVIASNWQLV HHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE VVSVAGYMLLKAFLIYGVARALGTTRRESLERAVLMAQGGEFAFVLYSAAVSAGILDREA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCC NAILTATIIISMVLTPLMVILHDRLVPAAVPNTDDLDVPENVEGSILLIGFGRFGQIVSQ CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHCC PLLARGYTLSLIDKDADFVRDAAEFGFKVYYGDGSRAEILHAAGASTARAVLICVDDKDA HHHHCCCEEEEECCCHHHHHHHHHCCEEEEECCCCCHHHHHHCCCCCCCEEEEEECCCCH AVRIAEIVKHEFPLVPVLARAYDRGHAIDLLKAGVDYQIRETLESALNFSEEVLGAMGEE HHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHCCCC REDAARLVEEFRDRDEERFAMEVVGGIYAGRSLIRGNAQPADLVAARTARERAEREKAEA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC EE CC >Mature Secondary Structure AVEANGNDLAQVVVLLAAGVIAAPIFKRIGLGSVLGYLAAGLVIGPYGLGFFSDSQAIL EECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCHHHH HVAELGVVMFLFIIGLEMQPSRLWSMRQDIFGLGALQVLVCMGGLTLVGVSLGFPVIMSF HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VAGTGFVLTSTAIVMQMLQERNSMSSLKGQRIIAILLFEDLAIVPLLALVAFLGSGGEHV HHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCEE TASERWLSIGIALAAVGALILAGRYLLNPFFRLLAASGAREVMTAAALLVVLGSALLMQV EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH SGLSMAMGAFLAGVLLSESSFRHQLEADIEPFRGILLGLFFLGVGMAIDLAVIASNWQLV HHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE VVSVAGYMLLKAFLIYGVARALGTTRRESLERAVLMAQGGEFAFVLYSAAVSAGILDREA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCC NAILTATIIISMVLTPLMVILHDRLVPAAVPNTDDLDVPENVEGSILLIGFGRFGQIVSQ CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHCC PLLARGYTLSLIDKDADFVRDAAEFGFKVYYGDGSRAEILHAAGASTARAVLICVDDKDA HHHHCCCEEEEECCCHHHHHHHHHCCEEEEECCCCCHHHHHHCCCCCCCEEEEEECCCCH AVRIAEIVKHEFPLVPVLARAYDRGHAIDLLKAGVDYQIRETLESALNFSEEVLGAMGEE HHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHCCCC REDAARLVEEFRDRDEERFAMEVVGGIYAGRSLIRGNAQPADLVAARTARERAEREKAEA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC EE CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]