Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889000
Identifier: 15889000
GI number: 15889000
Start: 1679659
End: 1680027
Strand: Reverse
Name: 15889000
Synonym: Atu1694
Alternate gene names: NA
Gene position: 1680027-1679659 (Counterclockwise)
Preceding gene: 159184876
Following gene: 15888999
Centisome position: 59.12
GC content: 60.7
Gene sequence:
>369_bases ATGAGTGATGCCTGGCCGACCGAGCTGCTTGTGTCGAAAGACCGGCGGGAATTGACCGTTTCCTTCGACGATGGAAGCAT TTACCGGCTTGGCGCCGAGATGTTGCGCGTGCTTTCGCCCTCGGCGGAAGTGCAGGGCCACGGGCCGGGACAAAAGGTCA CGGTGCCCGGCAAACGCGATGTCACGATCCGTTCGATGGTCGCCACCGGCAATTACGCGGTTCGCATCGTTTTCGACGAT GGCCACGATAGCGGCATCTACACCTGGAAATATCTGAAGGAGCTGGGTGAAACCGGCGACGCGCTGTTTGCCGATTATGA GCGGCAGCTTGCGGAGAAGGGCCTGAACAGGGAGCCGCGCTTCCGGTAG
Upstream 100 bases:
>100_bases CACGGGGCCGACTATGTGGCTTATAGCTGATGTAGTGGCTTGCCTATCCTGAGGCAAGTCCGTAATTCTGACGCATATGA CGAGCGTGCGGAAATGAAAA
Downstream 100 bases:
>100_bases CTGCGCGCCACTCCCTTATTCCTGTGCTTGTCACAGGAATCCAGCCGACGCACGTCCGTGCGGCGAAAAAGAGTGTTCTC CAGCCCAAGGACTTGGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSDAWPTELLVSKDRRELTVSFDDGSIYRLGAEMLRVLSPSAEVQGHGPGQKVTVPGKRDVTIRSMVATGNYAVRIVFDD GHDSGIYTWKYLKELGETGDALFADYERQLAEKGLNREPRFR
Sequences:
>Translated_122_residues MSDAWPTELLVSKDRRELTVSFDDGSIYRLGAEMLRVLSPSAEVQGHGPGQKVTVPGKRDVTIRSMVATGNYAVRIVFDD GHDSGIYTWKYLKELGETGDALFADYERQLAEKGLNREPRFR >Mature_121_residues SDAWPTELLVSKDRRELTVSFDDGSIYRLGAEMLRVLSPSAEVQGHGPGQKVTVPGKRDVTIRSMVATGNYAVRIVFDDG HDSGIYTWKYLKELGETGDALFADYERQLAEKGLNREPRFR
Specific function: Unknown
COG id: COG3536
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13708; Mature: 13576
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAWPTELLVSKDRRELTVSFDDGSIYRLGAEMLRVLSPSAEVQGHGPGQKVTVPGKRD CCCCCCCHHEECCCCCEEEEEECCCCEEHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCC VTIRSMVATGNYAVRIVFDDGHDSGIYTWKYLKELGETGDALFADYERQLAEKGLNREPR EEEEEEEECCCEEEEEEEECCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC FR CC >Mature Secondary Structure SDAWPTELLVSKDRRELTVSFDDGSIYRLGAEMLRVLSPSAEVQGHGPGQKVTVPGKRD CCCCCCHHEECCCCCEEEEEECCCCEEHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCC VTIRSMVATGNYAVRIVFDDGHDSGIYTWKYLKELGETGDALFADYERQLAEKGLNREPR EEEEEEEECCCEEEEEEEECCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC FR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA