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The map label for this gene is cvpA [H]

Identifier: 15888419

GI number: 15888419

Start: 1068621

End: 1069208

Strand: Reverse

Name: cvpA [H]

Synonym: Atu1076

Alternate gene names: 15888419

Gene position: 1069208-1068621 (Counterclockwise)

Preceding gene: 15888420

Following gene: 15888418

Centisome position: 37.63

GC content: 59.86

Gene sequence:

>588_bases
ATGCCCATTACAATTTTCGACGGCATCGTCATCGCCGTTGTTCTTTTCTCCGCCCTTCTTGCGATGGTGCGCGGTTTTTC
CCGCGAGATTCTGTCGATTGCGAGCTGGGGCGGCTCGGTCGCCGCGGCCTATTATCTTTATCCGGTCCTGCTGCCCTATG
CGCGCAACTATACCGATGACGACAAGATCGCCATTGCCGGTTCGGCAGGCGTGGTCTTCCTCGTCTCGCTGATCGTGATT
TCCTTCATCACCTCGCGCATTGCAGATTTCATCATCGACAGCCGCATCGGCGCGCTGGATCGCACGCTCGGTTTCCTGTT
CGGCGCGGCGCGCGGCATCCTGCTCTTGGTCGTCGCCGTCGCCTTCTGGAACTGGCTCGTGGATGTGAAGACGCAGCCGC
AATGGGTGACGCAGGCCAAGTCCAAGCCCTTCCTCGACGGGCTGGTGGGCAAGCTGGAGGCGGTTCTGCCTGACGATATC
GAACCGCAGATCCGCGCCCGCATCCTTGGAAAACCACAGGAACCGGCAGCCGCACAGACGCCTGCGGAAGATGTGCCGGC
AACAAATCAACCGGCAACGAATAATTGA

Upstream 100 bases:

>100_bases
ACGAATATTGATCCTTTCGCCAAGGGAAACAGTGGTGTAAGAGGATCGCAAAATTGGCAAGGCAGCGTCTGACAAGGCGT
CGCACCTCCGGAGTTGGTAT

Downstream 100 bases:

>100_bases
CACAGTGTCGCGCCTTGCAATGCATGCAAGGCGCGCTATTTGTGCTAAATATCAAGCACGACACAGATGGGCCGACCGGA
AGAGATACTTACCGGAGGGG

Product: colicin V production protein

Products: NA

Alternate protein names: Protein dedE; Pur regulon 18 kDa protein [H]

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MPITIFDGIVIAVVLFSALLAMVRGFSREILSIASWGGSVAAAYYLYPVLLPYARNYTDDDKIAIAGSAGVVFLVSLIVI
SFITSRIADFIIDSRIGALDRTLGFLFGAARGILLLVVAVAFWNWLVDVKTQPQWVTQAKSKPFLDGLVGKLEAVLPDDI
EPQIRARILGKPQEPAAAQTPAEDVPATNQPATNN

Sequences:

>Translated_195_residues
MPITIFDGIVIAVVLFSALLAMVRGFSREILSIASWGGSVAAAYYLYPVLLPYARNYTDDDKIAIAGSAGVVFLVSLIVI
SFITSRIADFIIDSRIGALDRTLGFLFGAARGILLLVVAVAFWNWLVDVKTQPQWVTQAKSKPFLDGLVGKLEAVLPDDI
EPQIRARILGKPQEPAAAQTPAEDVPATNQPATNN
>Mature_194_residues
PITIFDGIVIAVVLFSALLAMVRGFSREILSIASWGGSVAAAYYLYPVLLPYARNYTDDDKIAIAGSAGVVFLVSLIVIS
FITSRIADFIIDSRIGALDRTLGFLFGAARGILLLVVAVAFWNWLVDVKTQPQWVTQAKSKPFLDGLVGKLEAVLPDDIE
PQIRARILGKPQEPAAAQTPAEDVPATNQPATNN

Specific function: Required for colicin V production from plasmid IncFI ColV3-K30 [H]

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788652, Length=132, Percent_Identity=32.5757575757576, Blast_Score=68, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003825 [H]

Pfam domain/function: PF02674 Colicin_V [H]

EC number: NA

Molecular weight: Translated: 21015; Mature: 20884

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPITIFDGIVIAVVLFSALLAMVRGFSREILSIASWGGSVAAAYYLYPVLLPYARNYTDD
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
DKIAIAGSAGVVFLVSLIVISFITSRIADFIIDSRIGALDRTLGFLFGAARGILLLVVAV
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFWNWLVDVKTQPQWVTQAKSKPFLDGLVGKLEAVLPDDIEPQIRARILGKPQEPAAAQT
HHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCC
PAEDVPATNQPATNN
CHHCCCCCCCCCCCC
>Mature Secondary Structure 
PITIFDGIVIAVVLFSALLAMVRGFSREILSIASWGGSVAAAYYLYPVLLPYARNYTDD
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
DKIAIAGSAGVVFLVSLIVISFITSRIADFIIDSRIGALDRTLGFLFGAARGILLLVVAV
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFWNWLVDVKTQPQWVTQAKSKPFLDGLVGKLEAVLPDDIEPQIRARILGKPQEPAAAQT
HHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCC
PAEDVPATNQPATNN
CHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3040734; 2991286; 9205837; 9278503; 2542219 [H]